Protein–RNA interactions for Protein: Q4ZHG4

FNDC1, Fibronectin type III domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1Q4ZHG4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FNDC1Q4ZHG4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 AC093525.10-201ENST00000625130 1569 ntBASIC20.4■□□□□ 0.86
FNDC1Q4ZHG4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.39■□□□□ 0.86
FNDC1Q4ZHG4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 HLA-F-220ENST00000434407 884 ntBASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 AC034232.1-201ENST00000506026 1064 ntBASIC20.39■□□□□ 0.85
FNDC1Q4ZHG4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FNDC1Q4ZHG4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC1Q4ZHG4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC1Q4ZHG4 TPM4P1-201ENST00000436100 807 ntBASIC20.37■□□□□ 0.85
FNDC1Q4ZHG4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.37■□□□□ 0.85
FNDC1Q4ZHG4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC1Q4ZHG4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FNDC1Q4ZHG4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.37■□□□□ 0.85
FNDC1Q4ZHG4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms