Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 SEC1P-202ENST00000473944 940 ntBASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 MIR3180-1-201ENST00000580374 94 ntBASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 MIR3180-3-201ENST00000584616 94 ntBASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 AC079602.3-201ENST00000623931 403 ntBASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM71Q2Q1W2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 AC016734.2-201ENST00000624325 1377 ntBASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM71Q2Q1W2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 AP002383.4-201ENST00000442518 975 ntBASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 MIR3180-5-201ENST00000583743 153 ntBASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 AC011498.5-201ENST00000592027 486 ntBASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 KRT8P3-201ENST00000519669 1449 ntBASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM71Q2Q1W2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms