Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 KSR1P1-201ENST00000446298 240 ntBASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 AC004408.2-201ENST00000623613 2777 ntBASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RASGEF1BQ0VAM2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 AL032819.2-201ENST00000624543 2162 ntBASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 CR392000.1-201ENST00000624770 1228 ntBASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RASGEF1BQ0VAM2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 KRT16P1-201ENST00000399124 1418 ntBASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 FAM197Y1-201ENST00000421178 764 ntBASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 CD177P1-201ENST00000606252 935 ntBASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 AC113410.3-201ENST00000623366 203 ntBASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms