Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SYCNQ0VAF6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SYCNQ0VAF6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SYCNQ0VAF6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SYCNQ0VAF6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SYCNQ0VAF6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SYCNQ0VAF6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
SYCNQ0VAF6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 AC069544.1-201ENST00000609399 999 ntBASIC12.62□□□□□ -0.39
SYCNQ0VAF6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SYCNQ0VAF6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 SDHAP1-207ENST00000440850 2000 ntBASIC12.61□□□□□ -0.39
SYCNQ0VAF6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 AC239809.2-201ENST00000415381 517 ntBASIC12.61□□□□□ -0.39
SYCNQ0VAF6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.61□□□□□ -0.39
SYCNQ0VAF6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SYCNQ0VAF6 TNXA-203ENST00000507684 2038 ntBASIC12.61□□□□□ -0.39
SYCNQ0VAF6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms