Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AL160286.2-201ENST00000567150 934 ntBASIC18.76■□□□□ 0.59
CDKL1Q00532 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKL1Q00532 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDKL1Q00532 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.76■□□□□ 0.59
CDKL1Q00532 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDKL1Q00532 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKL1Q00532 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKL1Q00532 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.76■□□□□ 0.59
CDKL1Q00532 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKL1Q00532 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDKL1Q00532 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDKL1Q00532 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.75■□□□□ 0.59
CDKL1Q00532 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.75■□□□□ 0.59
CDKL1Q00532 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDKL1Q00532 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CDKL1Q00532 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDKL1Q00532 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.75■□□□□ 0.59
CDKL1Q00532 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.75■□□□□ 0.59
CDKL1Q00532 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.75■□□□□ 0.59
CDKL1Q00532 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.75■□□□□ 0.59
CDKL1Q00532 MIR4651-201ENST00000582622 73 ntBASIC18.75■□□□□ 0.59
CDKL1Q00532 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.75■□□□□ 0.59
CDKL1Q00532 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDKL1Q00532 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDKL1Q00532 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CDKL1Q00532 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDKL1Q00532 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDKL1Q00532 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CDKL1Q00532 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDKL1Q00532 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CDKL1Q00532 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
CDKL1Q00532 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.74■□□□□ 0.59
CDKL1Q00532 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CDKL1Q00532 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.74■□□□□ 0.59
CDKL1Q00532 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.74■□□□□ 0.59
CDKL1Q00532 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDKL1Q00532 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.74■□□□□ 0.59
CDKL1Q00532 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDKL1Q00532 AC138932.1-201ENST00000534164 6830 ntBASIC18.74■□□□□ 0.59
CDKL1Q00532 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.74■□□□□ 0.59
CDKL1Q00532 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.74■□□□□ 0.59
CDKL1Q00532 AL161938.1-201ENST00000569833 2180 ntBASIC18.74■□□□□ 0.59
CDKL1Q00532 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL1Q00532 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.73■□□□□ 0.59
CDKL1Q00532 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL1Q00532 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL1Q00532 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL1Q00532 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 LTB4R2-202ENST00000528054 3092 ntBASIC18.73■□□□□ 0.59
CDKL1Q00532 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.73■□□□□ 0.59
CDKL1Q00532 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.73■□□□□ 0.59
CDKL1Q00532 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDKL1Q00532 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.73■□□□□ 0.59
CDKL1Q00532 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDKL1Q00532 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL1Q00532 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.73■□□□□ 0.59
CDKL1Q00532 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL1Q00532 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDKL1Q00532 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms