Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD3P84022 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD3P84022 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SMAD3P84022 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD3P84022 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.59■□□□□ 0.89
SMAD3P84022 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SMAD3P84022 TOB2P1-201ENST00000469761 992 ntBASIC20.59■□□□□ 0.89
SMAD3P84022 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.59■□□□□ 0.89
SMAD3P84022 AC064862.7-201ENST00000604520 867 ntBASIC20.59■□□□□ 0.89
SMAD3P84022 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.59■□□□□ 0.89
SMAD3P84022 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD3P84022 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.59■□□□□ 0.89
SMAD3P84022 KRT8P11-201ENST00000409686 1436 ntBASIC20.59■□□□□ 0.89
SMAD3P84022 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMAD3P84022 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
SMAD3P84022 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD3P84022 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.59■□□□□ 0.89
SMAD3P84022 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD3P84022 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD3P84022 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD3P84022 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SMAD3P84022 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD3P84022 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD3P84022 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD3P84022 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD3P84022 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD3P84022 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.58■□□□□ 0.89
SMAD3P84022 KRT18P58-201ENST00000527480 1120 ntBASIC20.58■□□□□ 0.89
SMAD3P84022 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD3P84022 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.58■□□□□ 0.89
SMAD3P84022 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD3P84022 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SMAD3P84022 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMAD3P84022 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
SMAD3P84022 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMAD3P84022 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.57■□□□□ 0.88
SMAD3P84022 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.57■□□□□ 0.88
SMAD3P84022 IL9RP2-201ENST00000423948 1312 ntBASIC20.57■□□□□ 0.88
SMAD3P84022 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD3P84022 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD3P84022 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SMAD3P84022 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SMAD3P84022 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.57■□□□□ 0.88
SMAD3P84022 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.57■□□□□ 0.88
SMAD3P84022 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD3P84022 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.57■□□□□ 0.88
SMAD3P84022 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD3P84022 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.57■□□□□ 0.88
SMAD3P84022 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD3P84022 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.57■□□□□ 0.88
SMAD3P84022 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.57■□□□□ 0.88
SMAD3P84022 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.57■□□□□ 0.88
SMAD3P84022 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMAD3P84022 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SMAD3P84022 LINC01465-201ENST00000408887 1940 ntBASIC20.57■□□□□ 0.88
SMAD3P84022 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SMAD3P84022 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD3P84022 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD3P84022 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.56■□□□□ 0.88
SMAD3P84022 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD3P84022 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD3P84022 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD3P84022 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
SMAD3P84022 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD3P84022 HLA-F-220ENST00000434407 884 ntBASIC20.56■□□□□ 0.88
SMAD3P84022 AC104819.1-201ENST00000504587 486 ntBASIC20.56■□□□□ 0.88
SMAD3P84022 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.56■□□□□ 0.88
SMAD3P84022 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD3P84022 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.56■□□□□ 0.88
SMAD3P84022 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.56■□□□□ 0.88
SMAD3P84022 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.56■□□□□ 0.88
SMAD3P84022 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD3P84022 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.56■□□□□ 0.88
SMAD3P84022 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.56■□□□□ 0.88
SMAD3P84022 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMAD3P84022 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.55■□□□□ 0.88
SMAD3P84022 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.55■□□□□ 0.88
SMAD3P84022 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD3P84022 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.55■□□□□ 0.88
SMAD3P84022 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD3P84022 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.55■□□□□ 0.88
SMAD3P84022 MIR662-201ENST00000384847 95 ntBASIC20.55■□□□□ 0.88
SMAD3P84022 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.55■□□□□ 0.88
SMAD3P84022 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.55■□□□□ 0.88
SMAD3P84022 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.55■□□□□ 0.88
SMAD3P84022 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SMAD3P84022 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.55■□□□□ 0.88
SMAD3P84022 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SMAD3P84022 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SMAD3P84022 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SMAD3P84022 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.55■□□□□ 0.88
SMAD3P84022 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD3P84022 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.55■□□□□ 0.88
SMAD3P84022 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.55■□□□□ 0.88
SMAD3P84022 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD3P84022 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SMAD3P84022 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMAD3P84022 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.54■□□□□ 0.88
SMAD3P84022 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMAD3P84022 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms