Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YBX1P67809 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.61■□□□□ 0.57
YBX1P67809 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.61■□□□□ 0.57
YBX1P67809 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YBX1P67809 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
YBX1P67809 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
YBX1P67809 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.61■□□□□ 0.57
YBX1P67809 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
YBX1P67809 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
YBX1P67809 AL353807.1-201ENST00000427475 662 ntBASIC18.61■□□□□ 0.57
YBX1P67809 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
YBX1P67809 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.61■□□□□ 0.57
YBX1P67809 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
YBX1P67809 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.61■□□□□ 0.57
YBX1P67809 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.61■□□□□ 0.57
YBX1P67809 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.61■□□□□ 0.57
YBX1P67809 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.61■□□□□ 0.57
YBX1P67809 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YBX1P67809 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 AC026471.1-201ENST00000564629 3026 ntBASIC18.6■□□□□ 0.57
YBX1P67809 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
YBX1P67809 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
YBX1P67809 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.6■□□□□ 0.57
YBX1P67809 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 KRT16P1-201ENST00000399124 1418 ntBASIC18.6■□□□□ 0.57
YBX1P67809 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.6■□□□□ 0.57
YBX1P67809 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.6■□□□□ 0.57
YBX1P67809 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
YBX1P67809 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 AC008040.2-201ENST00000461049 708 ntBASIC18.6■□□□□ 0.57
YBX1P67809 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.6■□□□□ 0.57
YBX1P67809 Z85996.1-201ENST00000494644 937 ntBASIC18.6■□□□□ 0.57
YBX1P67809 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
YBX1P67809 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.6■□□□□ 0.57
YBX1P67809 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.6■□□□□ 0.57
YBX1P67809 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.6■□□□□ 0.57
YBX1P67809 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YBX1P67809 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
YBX1P67809 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.6■□□□□ 0.57
YBX1P67809 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
YBX1P67809 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
YBX1P67809 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
YBX1P67809 MIR718-201ENST00000390190 70 ntBASIC18.59■□□□□ 0.57
YBX1P67809 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 AC011506.1-201ENST00000474329 610 ntBASIC18.59■□□□□ 0.57
YBX1P67809 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.59■□□□□ 0.57
YBX1P67809 AL160286.2-201ENST00000567150 934 ntBASIC18.59■□□□□ 0.57
YBX1P67809 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
YBX1P67809 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.59■□□□□ 0.57
YBX1P67809 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.59■□□□□ 0.57
YBX1P67809 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 AC009113.1-201ENST00000570267 2443 ntBASIC18.59■□□□□ 0.57
YBX1P67809 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
YBX1P67809 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
YBX1P67809 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
YBX1P67809 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.58■□□□□ 0.57
YBX1P67809 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.58■□□□□ 0.57
YBX1P67809 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YBX1P67809 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YBX1P67809 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YBX1P67809 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
YBX1P67809 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
YBX1P67809 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
YBX1P67809 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms