Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
USP46P62068 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP46P62068 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.06■□□□□ 0.8
USP46P62068 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP46P62068 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.06■□□□□ 0.8
USP46P62068 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP46P62068 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP46P62068 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP46P62068 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP46P62068 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP46P62068 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP46P62068 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP46P62068 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.06■□□□□ 0.8
USP46P62068 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP46P62068 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP46P62068 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.06■□□□□ 0.8
USP46P62068 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.06■□□□□ 0.8
USP46P62068 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
USP46P62068 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.06■□□□□ 0.8
USP46P62068 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP46P62068 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
USP46P62068 AL353719.1-201ENST00000566847 864 ntBASIC20.06■□□□□ 0.8
USP46P62068 Z82202.1-201ENST00000623446 1880 ntBASIC20.06■□□□□ 0.8
USP46P62068 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
USP46P62068 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.06■□□□□ 0.8
USP46P62068 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.05■□□□□ 0.8
USP46P62068 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.05■□□□□ 0.8
USP46P62068 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
USP46P62068 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
USP46P62068 HMGA1P5-201ENST00000412453 271 ntBASIC20.05■□□□□ 0.8
USP46P62068 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 CA15P1-201ENST00000481698 905 ntBASIC20.05■□□□□ 0.8
USP46P62068 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.05■□□□□ 0.8
USP46P62068 AC006011.2-201ENST00000621313 1158 ntBASIC20.05■□□□□ 0.8
USP46P62068 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.05■□□□□ 0.8
USP46P62068 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.05■□□□□ 0.8
USP46P62068 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USP46P62068 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.05■□□□□ 0.8
USP46P62068 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP46P62068 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP46P62068 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.04■□□□□ 0.8
USP46P62068 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.04■□□□□ 0.8
USP46P62068 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.04■□□□□ 0.8
USP46P62068 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
USP46P62068 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.04■□□□□ 0.8
USP46P62068 LIN28AP1-201ENST00000429574 405 ntBASIC20.04■□□□□ 0.8
USP46P62068 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.04■□□□□ 0.8
USP46P62068 TSPY17P-201ENST00000450329 467 ntBASIC20.04■□□□□ 0.8
USP46P62068 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP46P62068 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
USP46P62068 AC010653.2-201ENST00000623505 997 ntBASIC20.04■□□□□ 0.8
USP46P62068 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP46P62068 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
USP46P62068 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
USP46P62068 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP46P62068 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.04■□□□□ 0.8
USP46P62068 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.04■□□□□ 0.8
USP46P62068 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP46P62068 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP46P62068 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP46P62068 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 AC087289.5-201ENST00000586076 3175 ntBASIC20.03■□□□□ 0.8
USP46P62068 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.03■□□□□ 0.8
USP46P62068 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.03■□□□□ 0.8
USP46P62068 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
USP46P62068 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
USP46P62068 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP46P62068 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 ATP5G1P1-201ENST00000448724 379 ntBASIC20.03■□□□□ 0.8
USP46P62068 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.03■□□□□ 0.8
USP46P62068 AP003041.3-201ENST00000527151 707 ntBASIC20.03■□□□□ 0.8
USP46P62068 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.03■□□□□ 0.8
USP46P62068 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
USP46P62068 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP46P62068 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP46P62068 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.03■□□□□ 0.8
USP46P62068 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.03■□□□□ 0.8
USP46P62068 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms