Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.81■□□□□ 0.6
SRP54P61011 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRP54P61011 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SRP54P61011 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 SDHAP1-207ENST00000440850 2000 ntBASIC18.8■□□□□ 0.6
SRP54P61011 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.8■□□□□ 0.6
SRP54P61011 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SRP54P61011 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SRP54P61011 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SRP54P61011 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.8■□□□□ 0.6
SRP54P61011 AK4P3-201ENST00000418260 669 ntBASIC18.8■□□□□ 0.6
SRP54P61011 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.8■□□□□ 0.6
SRP54P61011 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 AP003041.3-201ENST00000527151 707 ntBASIC18.8■□□□□ 0.6
SRP54P61011 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.8■□□□□ 0.6
SRP54P61011 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SRP54P61011 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.8■□□□□ 0.6
SRP54P61011 AL512604.3-201ENST00000569583 964 ntBASIC18.8■□□□□ 0.6
SRP54P61011 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SRP54P61011 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRP54P61011 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SRP54P61011 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SRP54P61011 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SRP54P61011 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.79■□□□□ 0.6
SRP54P61011 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.79■□□□□ 0.6
SRP54P61011 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SRP54P61011 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SRP54P61011 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP54P61011 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SRP54P61011 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SRP54P61011 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.78■□□□□ 0.6
SRP54P61011 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.78■□□□□ 0.6
SRP54P61011 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.78■□□□□ 0.6
SRP54P61011 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SRP54P61011 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.78■□□□□ 0.6
SRP54P61011 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.78■□□□□ 0.6
SRP54P61011 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.78■□□□□ 0.6
SRP54P61011 AC117947.1-201ENST00000427448 529 ntBASIC18.78■□□□□ 0.6
SRP54P61011 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.78■□□□□ 0.6
SRP54P61011 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SRP54P61011 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.78■□□□□ 0.6
SRP54P61011 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.78■□□□□ 0.6
SRP54P61011 WWOX-216ENST00000569818 525 ntBASIC18.78■□□□□ 0.6
SRP54P61011 NTF6B-201ENST00000591913 560 ntBASIC18.78■□□□□ 0.6
SRP54P61011 AC139887.4-201ENST00000607877 719 ntBASIC18.78■□□□□ 0.6
SRP54P61011 AC141257.4-201ENST00000634557 245 ntBASIC18.78■□□□□ 0.6
SRP54P61011 AC136944.6-201ENST00000634818 245 ntBASIC18.78■□□□□ 0.6
SRP54P61011 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.78■□□□□ 0.6
SRP54P61011 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.78■□□□□ 0.6
SRP54P61011 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SRP54P61011 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP54P61011 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRP54P61011 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRP54P61011 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRP54P61011 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRP54P61011 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRP54P61011 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRP54P61011 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRP54P61011 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms