Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ACLYP53396 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACLYP53396 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACLYP53396 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ACLYP53396 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.03■□□□□ 0.96
ACLYP53396 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACLYP53396 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACLYP53396 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.03■□□□□ 0.96
ACLYP53396 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACLYP53396 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACLYP53396 TSPY19P-201ENST00000418461 509 ntBASIC21.03■□□□□ 0.96
ACLYP53396 TSPY22P-201ENST00000427496 604 ntBASIC21.03■□□□□ 0.96
ACLYP53396 TSPY18P-201ENST00000441642 509 ntBASIC21.03■□□□□ 0.96
ACLYP53396 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.03■□□□□ 0.96
ACLYP53396 MCCD1P1-208ENST00000445732 328 ntBASIC21.03■□□□□ 0.96
ACLYP53396 EMBP1-201ENST00000458200 901 ntBASIC21.03■□□□□ 0.96
ACLYP53396 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
ACLYP53396 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.03■□□□□ 0.96
ACLYP53396 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.03■□□□□ 0.96
ACLYP53396 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.03■□□□□ 0.96
ACLYP53396 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACLYP53396 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.03■□□□□ 0.96
ACLYP53396 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACLYP53396 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.03■□□□□ 0.96
ACLYP53396 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ACLYP53396 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ACLYP53396 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACLYP53396 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ACLYP53396 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.02■□□□□ 0.96
ACLYP53396 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACLYP53396 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACLYP53396 SDHAP1-207ENST00000440850 2000 ntBASIC21.02■□□□□ 0.96
ACLYP53396 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACLYP53396 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACLYP53396 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ACLYP53396 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACLYP53396 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.02■□□□□ 0.96
ACLYP53396 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.02■□□□□ 0.96
ACLYP53396 MIR662-201ENST00000384847 95 ntBASIC21.02■□□□□ 0.96
ACLYP53396 AC009078.2-202ENST00000463353 338 ntBASIC21.02■□□□□ 0.96
ACLYP53396 AL136038.4-201ENST00000603606 1261 ntBASIC21.02■□□□□ 0.96
ACLYP53396 AL732292.2-201ENST00000609649 430 ntBASIC21.02■□□□□ 0.96
ACLYP53396 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.02■□□□□ 0.96
ACLYP53396 AL391807.1-203ENST00000604392 2365 ntBASIC21.02■□□□□ 0.96
ACLYP53396 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ACLYP53396 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ACLYP53396 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ACLYP53396 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ACLYP53396 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ACLYP53396 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACLYP53396 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.01■□□□□ 0.95
ACLYP53396 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACLYP53396 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACLYP53396 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ACLYP53396 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACLYP53396 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.01■□□□□ 0.95
ACLYP53396 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACLYP53396 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACLYP53396 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ACLYP53396 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ACLYP53396 MIR3917-201ENST00000580971 93 ntBASIC21.01■□□□□ 0.95
ACLYP53396 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.01■□□□□ 0.95
ACLYP53396 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.01■□□□□ 0.95
ACLYP53396 AC112497.1-201ENST00000624824 639 ntBASIC21.01■□□□□ 0.95
ACLYP53396 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ACLYP53396 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACLYP53396 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ACLYP53396 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ACLYP53396 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ACLYP53396 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.01■□□□□ 0.95
ACLYP53396 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ACLYP53396 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ACLYP53396 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ACLYP53396 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21■□□□□ 0.95
ACLYP53396 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21■□□□□ 0.95
ACLYP53396 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21■□□□□ 0.95
ACLYP53396 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21■□□□□ 0.95
ACLYP53396 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACLYP53396 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACLYP53396 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21■□□□□ 0.95
ACLYP53396 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ACLYP53396 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21■□□□□ 0.95
ACLYP53396 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21■□□□□ 0.95
ACLYP53396 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACLYP53396 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACLYP53396 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21■□□□□ 0.95
ACLYP53396 TPSP2-201ENST00000561760 610 ntBASIC21■□□□□ 0.95
ACLYP53396 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
ACLYP53396 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ACLYP53396 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21■□□□□ 0.95
ACLYP53396 AL031008.1-201ENST00000619963 541 ntBASIC21■□□□□ 0.95
ACLYP53396 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACLYP53396 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ACLYP53396 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21■□□□□ 0.95
ACLYP53396 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms