Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.52■□□□□ 0.56
PDX1P52945 AC092647.4-201ENST00000457211 535 ntBASIC18.52■□□□□ 0.56
PDX1P52945 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDX1P52945 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDX1P52945 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.52■□□□□ 0.56
PDX1P52945 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.52■□□□□ 0.56
PDX1P52945 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PDX1P52945 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.52■□□□□ 0.56
PDX1P52945 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.52■□□□□ 0.56
PDX1P52945 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.52■□□□□ 0.56
PDX1P52945 KRT8P41-201ENST00000533985 1514 ntBASIC18.52■□□□□ 0.56
PDX1P52945 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDX1P52945 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDX1P52945 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PDX1P52945 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDX1P52945 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.51■□□□□ 0.55
PDX1P52945 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.51■□□□□ 0.55
PDX1P52945 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.51■□□□□ 0.55
PDX1P52945 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.51■□□□□ 0.55
PDX1P52945 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.51■□□□□ 0.55
PDX1P52945 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PDX1P52945 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.51■□□□□ 0.55
PDX1P52945 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.51■□□□□ 0.55
PDX1P52945 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.51■□□□□ 0.55
PDX1P52945 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.51■□□□□ 0.55
PDX1P52945 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.51■□□□□ 0.55
PDX1P52945 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.51■□□□□ 0.55
PDX1P52945 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDX1P52945 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDX1P52945 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDX1P52945 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDX1P52945 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDX1P52945 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDX1P52945 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.5■□□□□ 0.55
PDX1P52945 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDX1P52945 CA15P1-201ENST00000481698 905 ntBASIC18.5■□□□□ 0.55
PDX1P52945 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.5■□□□□ 0.55
PDX1P52945 FAM86EP-206ENST00000510506 987 ntBASIC18.5■□□□□ 0.55
PDX1P52945 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDX1P52945 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.5■□□□□ 0.55
PDX1P52945 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.5■□□□□ 0.55
PDX1P52945 CKBP1-201ENST00000565489 1086 ntBASIC18.5■□□□□ 0.55
PDX1P52945 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDX1P52945 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.5■□□□□ 0.55
PDX1P52945 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.5■□□□□ 0.55
PDX1P52945 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.5■□□□□ 0.55
PDX1P52945 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
PDX1P52945 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.5■□□□□ 0.55
PDX1P52945 AP000550.4-202ENST00000639755 178 ntBASIC18.5■□□□□ 0.55
PDX1P52945 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.5■□□□□ 0.55
PDX1P52945 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PDX1P52945 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.5■□□□□ 0.55
PDX1P52945 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PDX1P52945 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDX1P52945 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDX1P52945 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDX1P52945 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
PDX1P52945 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PDX1P52945 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.49■□□□□ 0.55
PDX1P52945 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PDX1P52945 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 AC009947.2-201ENST00000444014 672 ntBASIC18.49■□□□□ 0.55
PDX1P52945 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
PDX1P52945 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.49■□□□□ 0.55
PDX1P52945 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 AL441883.1-201ENST00000566170 1045 ntBASIC18.49■□□□□ 0.55
PDX1P52945 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.49■□□□□ 0.55
PDX1P52945 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.49■□□□□ 0.55
PDX1P52945 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.49■□□□□ 0.55
PDX1P52945 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.49■□□□□ 0.55
PDX1P52945 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.49■□□□□ 0.55
PDX1P52945 AL023973.1-201ENST00000624619 620 ntBASIC18.49■□□□□ 0.55
PDX1P52945 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.49■□□□□ 0.55
PDX1P52945 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDX1P52945 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.49■□□□□ 0.55
PDX1P52945 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDX1P52945 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDX1P52945 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms