Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RNF144AP50876 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNF144AP50876 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF144AP50876 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.73■□□□□ 0.43
RNF144AP50876 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF144AP50876 AC110285.5-201ENST00000611501 352 ntBASIC17.73■□□□□ 0.43
RNF144AP50876 AL359736.2-201ENST00000621992 437 ntBASIC17.73■□□□□ 0.43
RNF144AP50876 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF144AP50876 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF144AP50876 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF144AP50876 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF144AP50876 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF144AP50876 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF144AP50876 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF144AP50876 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF144AP50876 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF144AP50876 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF144AP50876 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RNF144AP50876 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
RNF144AP50876 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF144AP50876 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF144AP50876 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF144AP50876 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF144AP50876 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF144AP50876 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF144AP50876 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF144AP50876 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF144AP50876 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF144AP50876 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF144AP50876 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF144AP50876 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF144AP50876 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF144AP50876 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF144AP50876 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RNF144AP50876 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RNF144AP50876 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RNF144AP50876 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RNF144AP50876 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF144AP50876 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF144AP50876 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RNF144AP50876 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF144AP50876 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF144AP50876 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RNF144AP50876 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RNF144AP50876 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF144AP50876 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RNF144AP50876 HTR7P1-201ENST00000538670 1336 ntBASIC17.71■□□□□ 0.42
RNF144AP50876 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
RNF144AP50876 AC141586.3-201ENST00000562166 1838 ntBASIC17.7■□□□□ 0.42
RNF144AP50876 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF144AP50876 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF144AP50876 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
RNF144AP50876 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF144AP50876 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF144AP50876 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.7■□□□□ 0.42
RNF144AP50876 KRT16P5-201ENST00000455284 522 ntBASIC17.7■□□□□ 0.42
RNF144AP50876 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF144AP50876 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 AC142381.4-202ENST00000563973 229 ntBASIC17.7■□□□□ 0.42
RNF144AP50876 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNF144AP50876 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF144AP50876 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF144AP50876 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms