Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1A1P48729 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1A1P48729 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1A1P48729 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1A1P48729 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1A1P48729 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.98■□□□□ 0.31
CSNK1A1P48729 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1A1P48729 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.98■□□□□ 0.31
CSNK1A1P48729 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.98■□□□□ 0.31
CSNK1A1P48729 AL031985.4-201ENST00000642138 673 ntBASIC16.98■□□□□ 0.31
CSNK1A1P48729 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1A1P48729 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.98■□□□□ 0.31
CSNK1A1P48729 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1A1P48729 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CSNK1A1P48729 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.98■□□□□ 0.31
CSNK1A1P48729 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1A1P48729 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1A1P48729 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.98■□□□□ 0.31
CSNK1A1P48729 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CSNK1A1P48729 AC018445.3-201ENST00000624177 1945 ntBASIC16.98■□□□□ 0.31
CSNK1A1P48729 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 AC087289.5-201ENST00000586076 3175 ntBASIC16.97■□□□□ 0.31
CSNK1A1P48729 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 AC026271.3-201ENST00000571884 352 ntBASIC16.97■□□□□ 0.31
CSNK1A1P48729 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1A1P48729 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 BX323043.1-201ENST00000641006 1765 ntBASIC16.97■□□□□ 0.31
CSNK1A1P48729 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.97■□□□□ 0.31
CSNK1A1P48729 AL161938.1-201ENST00000569833 2180 ntBASIC16.96■□□□□ 0.31
CSNK1A1P48729 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1A1P48729 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 KRT8P41-201ENST00000533985 1514 ntBASIC16.96■□□□□ 0.31
CSNK1A1P48729 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1A1P48729 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1A1P48729 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1A1P48729 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1A1P48729 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 AP001412.1-201ENST00000608405 714 ntBASIC16.96■□□□□ 0.31
CSNK1A1P48729 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1A1P48729 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1A1P48729 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1A1P48729 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.96■□□□□ 0.3
CSNK1A1P48729 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CSNK1A1P48729 IRX1P1-201ENST00000438849 1838 ntBASIC16.96■□□□□ 0.3
CSNK1A1P48729 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CSNK1A1P48729 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CSNK1A1P48729 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CSNK1A1P48729 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.96■□□□□ 0.3
CSNK1A1P48729 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 FP475955.4-201ENST00000623131 1990 ntBASIC16.95■□□□□ 0.3
CSNK1A1P48729 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 FAM197Y1-201ENST00000421178 764 ntBASIC16.95■□□□□ 0.3
CSNK1A1P48729 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.95■□□□□ 0.3
CSNK1A1P48729 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms