Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2CP42773 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDKN2CP42773 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKN2CP42773 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN2CP42773 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKN2CP42773 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDKN2CP42773 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN2CP42773 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
CDKN2CP42773 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.04■□□□□ 0.48
CDKN2CP42773 AC142086.2-201ENST00000569753 217 ntBASIC18.04■□□□□ 0.48
CDKN2CP42773 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKN2CP42773 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN2CP42773 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN2CP42773 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN2CP42773 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDKN2CP42773 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKN2CP42773 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKN2CP42773 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2CP42773 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDKN2CP42773 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2CP42773 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKN2CP42773 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2CP42773 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2CP42773 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.03■□□□□ 0.48
CDKN2CP42773 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2CP42773 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2CP42773 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2CP42773 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDKN2CP42773 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.03■□□□□ 0.48
CDKN2CP42773 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN2CP42773 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.02■□□□□ 0.48
CDKN2CP42773 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDKN2CP42773 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.02■□□□□ 0.48
CDKN2CP42773 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDKN2CP42773 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.02■□□□□ 0.48
CDKN2CP42773 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDKN2CP42773 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.02■□□□□ 0.48
CDKN2CP42773 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CDKN2CP42773 POM121L13P-201ENST00000422362 380 ntBASIC18.02■□□□□ 0.48
CDKN2CP42773 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.02■□□□□ 0.48
CDKN2CP42773 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.02■□□□□ 0.48
CDKN2CP42773 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.02■□□□□ 0.48
CDKN2CP42773 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.02■□□□□ 0.48
CDKN2CP42773 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDKN2CP42773 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDKN2CP42773 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDKN2CP42773 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDKN2CP42773 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.02■□□□□ 0.47
CDKN2CP42773 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.02■□□□□ 0.47
CDKN2CP42773 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDKN2CP42773 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDKN2CP42773 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CDKN2CP42773 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms