Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.87■□□□□ 0.93
KRT9P35527 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
KRT9P35527 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT9P35527 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT9P35527 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT9P35527 KRT18P6-201ENST00000555540 1265 ntBASIC20.87■□□□□ 0.93
KRT9P35527 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.87■□□□□ 0.93
KRT9P35527 AL121829.2-201ENST00000620908 328 ntBASIC20.87■□□□□ 0.93
KRT9P35527 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
KRT9P35527 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KRT9P35527 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KRT9P35527 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KRT9P35527 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT9P35527 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT9P35527 AL512353.2-201ENST00000448759 1962 ntBASIC20.86■□□□□ 0.93
KRT9P35527 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT9P35527 AC090164.3-201ENST00000610780 2143 ntBASIC20.86■□□□□ 0.93
KRT9P35527 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT9P35527 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT9P35527 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT9P35527 POM121L13P-201ENST00000422362 380 ntBASIC20.86■□□□□ 0.93
KRT9P35527 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.86■□□□□ 0.93
KRT9P35527 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT9P35527 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT9P35527 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.86■□□□□ 0.93
KRT9P35527 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT9P35527 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT9P35527 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KRT9P35527 AP006587.1-201ENST00000534129 1502 ntBASIC20.86■□□□□ 0.93
KRT9P35527 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT9P35527 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.86■□□□□ 0.93
KRT9P35527 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT9P35527 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT9P35527 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KRT9P35527 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT9P35527 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT9P35527 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT9P35527 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT9P35527 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.85■□□□□ 0.93
KRT9P35527 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.85■□□□□ 0.93
KRT9P35527 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.85■□□□□ 0.93
KRT9P35527 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 AC026471.1-201ENST00000564629 3026 ntBASIC20.85■□□□□ 0.93
KRT9P35527 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.85■□□□□ 0.93
KRT9P35527 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.85■□□□□ 0.93
KRT9P35527 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
KRT9P35527 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
KRT9P35527 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT9P35527 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.84■□□□□ 0.93
KRT9P35527 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT9P35527 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
KRT9P35527 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT9P35527 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KRT9P35527 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.84■□□□□ 0.93
KRT9P35527 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT9P35527 AC135050.7-201ENST00000624508 2218 ntBASIC20.84■□□□□ 0.93
KRT9P35527 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.84■□□□□ 0.93
KRT9P35527 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT9P35527 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT9P35527 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT9P35527 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
KRT9P35527 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT9P35527 YBX1P10-201ENST00000444752 975 ntBASIC20.84■□□□□ 0.93
KRT9P35527 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
KRT9P35527 AP003097.1-201ENST00000530657 1135 ntBASIC20.84■□□□□ 0.93
KRT9P35527 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
KRT9P35527 AC008403.3-201ENST00000598924 454 ntBASIC20.84■□□□□ 0.93
KRT9P35527 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.84■□□□□ 0.93
KRT9P35527 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT9P35527 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT9P35527 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT9P35527 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT9P35527 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
KRT9P35527 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT9P35527 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT9P35527 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT9P35527 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
KRT9P35527 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.83■□□□□ 0.93
KRT9P35527 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.83■□□□□ 0.93
KRT9P35527 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT9P35527 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT9P35527 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
KRT9P35527 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms