Protein–RNA interactions for Protein: P24863

CCNC, Cyclin-C, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNCP24863 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNCP24863 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNCP24863 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNCP24863 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNCP24863 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNCP24863 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNCP24863 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNCP24863 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNCP24863 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNCP24863 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNCP24863 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNCP24863 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNCP24863 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.45■□□□□ 0.7
CCNCP24863 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.45■□□□□ 0.7
CCNCP24863 AP000692.2-201ENST00000608391 879 ntBASIC19.45■□□□□ 0.7
CCNCP24863 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNCP24863 AC087289.5-201ENST00000586076 3175 ntBASIC19.45■□□□□ 0.7
CCNCP24863 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCNCP24863 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNCP24863 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNCP24863 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CCNCP24863 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNCP24863 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCNCP24863 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCNCP24863 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNCP24863 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CCNCP24863 AL355355.2-201ENST00000442321 338 ntBASIC19.44■□□□□ 0.7
CCNCP24863 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNCP24863 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.44■□□□□ 0.7
CCNCP24863 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNCP24863 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCNCP24863 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCNCP24863 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CCNCP24863 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.44■□□□□ 0.7
CCNCP24863 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNCP24863 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNCP24863 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNCP24863 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNCP24863 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNCP24863 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNCP24863 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNCP24863 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNCP24863 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.43■□□□□ 0.7
CCNCP24863 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCNCP24863 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNCP24863 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNCP24863 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCNCP24863 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNCP24863 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.43■□□□□ 0.7
CCNCP24863 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNCP24863 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CCNCP24863 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNCP24863 CKBP1-201ENST00000565489 1086 ntBASIC19.43■□□□□ 0.7
CCNCP24863 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.43■□□□□ 0.7
CCNCP24863 AC026471.5-201ENST00000615068 467 ntBASIC19.43■□□□□ 0.7
CCNCP24863 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNCP24863 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCNCP24863 AC006333.2-201ENST00000607957 2099 ntBASIC19.43■□□□□ 0.7
CCNCP24863 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNCP24863 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNCP24863 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CCNCP24863 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.43■□□□□ 0.7
CCNCP24863 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNCP24863 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCNCP24863 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNCP24863 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CCNCP24863 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNCP24863 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNCP24863 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNCP24863 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNCP24863 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNCP24863 TNXA-203ENST00000507684 2038 ntBASIC19.42■□□□□ 0.7
CCNCP24863 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNCP24863 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNCP24863 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNCP24863 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNCP24863 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNCP24863 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCNCP24863 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNCP24863 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNCP24863 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNCP24863 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNCP24863 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.42■□□□□ 0.7
CCNCP24863 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNCP24863 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.42■□□□□ 0.7
CCNCP24863 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCNCP24863 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNCP24863 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms