Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KCNA3P22001 MIR3180-5-201ENST00000583743 153 ntBASIC23.42■■□□□ 1.34
KCNA3P22001 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
KCNA3P22001 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
KCNA3P22001 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
KCNA3P22001 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
KCNA3P22001 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
KCNA3P22001 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
KCNA3P22001 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.41■■□□□ 1.34
KCNA3P22001 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
KCNA3P22001 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KCNA3P22001 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.41■■□□□ 1.34
KCNA3P22001 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KCNA3P22001 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KCNA3P22001 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.41■■□□□ 1.34
KCNA3P22001 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC23.41■■□□□ 1.34
KCNA3P22001 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.41■■□□□ 1.34
KCNA3P22001 AC099336.1-202ENST00000602961 463 ntBASIC23.41■■□□□ 1.34
KCNA3P22001 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KCNA3P22001 REXO1L6P-202ENST00000619970 1078 ntBASIC23.41■■□□□ 1.34
KCNA3P22001 AC104417.2-201ENST00000562989 1793 ntBASIC23.41■■□□□ 1.34
KCNA3P22001 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KCNA3P22001 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KCNA3P22001 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
KCNA3P22001 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.41■■□□□ 1.34
KCNA3P22001 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KCNA3P22001 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.4■■□□□ 1.34
KCNA3P22001 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
KCNA3P22001 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.4■■□□□ 1.34
KCNA3P22001 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.4■■□□□ 1.34
KCNA3P22001 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KCNA3P22001 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.4■■□□□ 1.34
KCNA3P22001 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.4■■□□□ 1.34
KCNA3P22001 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KCNA3P22001 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC23.4■■□□□ 1.34
KCNA3P22001 AC090616.6-201ENST00000582640 721 ntBASIC23.4■■□□□ 1.34
KCNA3P22001 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
KCNA3P22001 AC112497.1-201ENST00000624824 639 ntBASIC23.4■■□□□ 1.34
KCNA3P22001 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KCNA3P22001 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
KCNA3P22001 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.4■■□□□ 1.34
KCNA3P22001 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
KCNA3P22001 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.39■■□□□ 1.34
KCNA3P22001 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.39■■□□□ 1.34
KCNA3P22001 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
KCNA3P22001 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
KCNA3P22001 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
KCNA3P22001 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
KCNA3P22001 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.39■■□□□ 1.33
KCNA3P22001 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.39■■□□□ 1.33
KCNA3P22001 AC005332.3-201ENST00000589904 676 ntBASIC23.39■■□□□ 1.33
KCNA3P22001 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.39■■□□□ 1.33
KCNA3P22001 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.39■■□□□ 1.33
KCNA3P22001 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.39■■□□□ 1.33
KCNA3P22001 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
KCNA3P22001 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
KCNA3P22001 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.38■■□□□ 1.33
KCNA3P22001 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.38■■□□□ 1.33
KCNA3P22001 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNA3P22001 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
KCNA3P22001 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
KCNA3P22001 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.38■■□□□ 1.33
KCNA3P22001 SAPCD2P3-201ENST00000455031 850 ntBASIC23.38■■□□□ 1.33
KCNA3P22001 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.38■■□□□ 1.33
KCNA3P22001 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
KCNA3P22001 AP001005.1-201ENST00000571755 1248 ntBASIC23.38■■□□□ 1.33
KCNA3P22001 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.38■■□□□ 1.33
KCNA3P22001 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
KCNA3P22001 AL390719.2-201ENST00000606993 987 ntBASIC23.38■■□□□ 1.33
KCNA3P22001 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.38■■□□□ 1.33
KCNA3P22001 AC009237.14-201ENST00000609975 1594 ntBASIC23.38■■□□□ 1.33
KCNA3P22001 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNA3P22001 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
KCNA3P22001 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNA3P22001 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KCNA3P22001 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.37■■□□□ 1.33
KCNA3P22001 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KCNA3P22001 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KCNA3P22001 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.37■■□□□ 1.33
KCNA3P22001 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
KCNA3P22001 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KCNA3P22001 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.37■■□□□ 1.33
KCNA3P22001 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC23.37■■□□□ 1.33
KCNA3P22001 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
KCNA3P22001 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.37■■□□□ 1.33
KCNA3P22001 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.37■■□□□ 1.33
KCNA3P22001 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KCNA3P22001 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.37■■□□□ 1.33
KCNA3P22001 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
KCNA3P22001 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KCNA3P22001 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
KCNA3P22001 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
KCNA3P22001 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
KCNA3P22001 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KCNA3P22001 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
KCNA3P22001 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KCNA3P22001 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
KCNA3P22001 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.36■■□□□ 1.33
KCNA3P22001 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
KCNA3P22001 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms