Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.42■□□□□ 0.7
NFKB1P19838 AC073195.1-201ENST00000607241 877 ntBASIC19.42■□□□□ 0.7
NFKB1P19838 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.42■□□□□ 0.7
NFKB1P19838 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NFKB1P19838 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.42■□□□□ 0.7
NFKB1P19838 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
NFKB1P19838 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.42■□□□□ 0.7
NFKB1P19838 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NFKB1P19838 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NFKB1P19838 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NFKB1P19838 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.41■□□□□ 0.7
NFKB1P19838 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NFKB1P19838 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.41■□□□□ 0.7
NFKB1P19838 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NFKB1P19838 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NFKB1P19838 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
NFKB1P19838 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NFKB1P19838 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NFKB1P19838 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NFKB1P19838 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NFKB1P19838 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.41■□□□□ 0.7
NFKB1P19838 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.4■□□□□ 0.7
NFKB1P19838 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 AL020996.1-203ENST00000536896 2307 ntBASIC19.4■□□□□ 0.7
NFKB1P19838 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NFKB1P19838 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.4■□□□□ 0.7
NFKB1P19838 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.4■□□□□ 0.7
NFKB1P19838 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
NFKB1P19838 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.4■□□□□ 0.7
NFKB1P19838 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.4■□□□□ 0.7
NFKB1P19838 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.4■□□□□ 0.7
NFKB1P19838 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.4■□□□□ 0.7
NFKB1P19838 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.4■□□□□ 0.7
NFKB1P19838 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.4■□□□□ 0.7
NFKB1P19838 RCC2P6-201ENST00000526625 1557 ntBASIC19.4■□□□□ 0.7
NFKB1P19838 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NFKB1P19838 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.4■□□□□ 0.7
NFKB1P19838 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
NFKB1P19838 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
NFKB1P19838 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NFKB1P19838 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NFKB1P19838 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.39■□□□□ 0.69
NFKB1P19838 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NFKB1P19838 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NFKB1P19838 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NFKB1P19838 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NFKB1P19838 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NFKB1P19838 UBE2SP1-201ENST00000450587 669 ntBASIC19.39■□□□□ 0.69
NFKB1P19838 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.39■□□□□ 0.69
NFKB1P19838 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NFKB1P19838 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NFKB1P19838 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.39■□□□□ 0.69
NFKB1P19838 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.39■□□□□ 0.69
NFKB1P19838 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NFKB1P19838 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.39■□□□□ 0.69
NFKB1P19838 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NFKB1P19838 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NFKB1P19838 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NFKB1P19838 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NFKB1P19838 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NFKB1P19838 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NFKB1P19838 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NFKB1P19838 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NFKB1P19838 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NFKB1P19838 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NFKB1P19838 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NFKB1P19838 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NFKB1P19838 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
NFKB1P19838 KRT8P11-201ENST00000409686 1436 ntBASIC19.38■□□□□ 0.69
NFKB1P19838 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
NFKB1P19838 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.38■□□□□ 0.69
NFKB1P19838 FAM197Y1-201ENST00000421178 764 ntBASIC19.38■□□□□ 0.69
NFKB1P19838 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.38■□□□□ 0.69
NFKB1P19838 AC091390.4-202ENST00000476426 537 ntBASIC19.38■□□□□ 0.69
NFKB1P19838 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NFKB1P19838 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NFKB1P19838 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NFKB1P19838 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NFKB1P19838 AL031985.4-201ENST00000642138 673 ntBASIC19.38■□□□□ 0.69
NFKB1P19838 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms