Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 RCN1P1-201ENST00000400413 996 ntBASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 AC011506.1-201ENST00000474329 610 ntBASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 AC005363.2-201ENST00000618631 242 ntBASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.28■□□□□ 0.36
TMIGD3P0DMS9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 CYP2D8P-201ENST00000433633 1490 ntBASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.27■□□□□ 0.36
TMIGD3P0DMS9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMIGD3P0DMS9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TMIGD3P0DMS9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
TMIGD3P0DMS9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMIGD3P0DMS9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 KRT18P22-201ENST00000402024 1347 ntBASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 AC097488.1-201ENST00000507834 756 ntBASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 C2orf69P3-201ENST00000565542 1120 ntBASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 AC010947.1-201ENST00000623454 693 ntBASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 AC093503.3-201ENST00000624917 2352 ntBASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMIGD3P0DMS9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 RCC2P6-201ENST00000526625 1557 ntBASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 CRYGFP-201ENST00000418459 633 ntBASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 AC004951.3-201ENST00000418645 1148 ntBASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 TMPOP1-202ENST00000424642 1267 ntBASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 AP005242.2-201ENST00000580065 1175 ntBASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 AC010331.1-201ENST00000611423 582 ntBASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 AC011298.2-201ENST00000617989 482 ntBASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMIGD3P0DMS9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms