Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.73■□□□□ 0.27
UBCP0CG48 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UBCP0CG48 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.73■□□□□ 0.27
UBCP0CG48 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBCP0CG48 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.73■□□□□ 0.27
UBCP0CG48 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 GUSBP6-202ENST00000438529 1198 ntBASIC16.73■□□□□ 0.27
UBCP0CG48 TSPY6P-201ENST00000448518 926 ntBASIC16.73■□□□□ 0.27
UBCP0CG48 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.73■□□□□ 0.27
UBCP0CG48 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.73■□□□□ 0.27
UBCP0CG48 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.73■□□□□ 0.27
UBCP0CG48 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.73■□□□□ 0.27
UBCP0CG48 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.73■□□□□ 0.27
UBCP0CG48 MYC-209ENST00000641252 345 ntBASIC16.73■□□□□ 0.27
UBCP0CG48 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
UBCP0CG48 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.73■□□□□ 0.27
UBCP0CG48 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
UBCP0CG48 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBCP0CG48 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.73■□□□□ 0.27
UBCP0CG48 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBCP0CG48 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.72■□□□□ 0.27
UBCP0CG48 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBCP0CG48 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBCP0CG48 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
UBCP0CG48 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBCP0CG48 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.72■□□□□ 0.27
UBCP0CG48 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBCP0CG48 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBCP0CG48 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.72■□□□□ 0.27
UBCP0CG48 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBCP0CG48 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UBCP0CG48 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBCP0CG48 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBCP0CG48 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBCP0CG48 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.72■□□□□ 0.27
UBCP0CG48 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.72■□□□□ 0.27
UBCP0CG48 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
UBCP0CG48 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.72■□□□□ 0.27
UBCP0CG48 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.72■□□□□ 0.27
UBCP0CG48 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.72■□□□□ 0.27
UBCP0CG48 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
UBCP0CG48 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.72■□□□□ 0.27
UBCP0CG48 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.72■□□□□ 0.27
UBCP0CG48 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.72■□□□□ 0.27
UBCP0CG48 AC120498.8-201ENST00000614275 531 ntBASIC16.72■□□□□ 0.27
UBCP0CG48 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBCP0CG48 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBCP0CG48 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBCP0CG48 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBCP0CG48 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
UBCP0CG48 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UBCP0CG48 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBCP0CG48 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
UBCP0CG48 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
UBCP0CG48 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
UBCP0CG48 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
UBCP0CG48 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
UBCP0CG48 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 FEM1AP3-201ENST00000403722 1741 ntBASIC16.71■□□□□ 0.27
UBCP0CG48 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.71■□□□□ 0.27
UBCP0CG48 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.71■□□□□ 0.27
UBCP0CG48 NCF1B-203ENST00000435988 1254 ntBASIC16.71■□□□□ 0.27
UBCP0CG48 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.71■□□□□ 0.27
UBCP0CG48 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.71■□□□□ 0.27
UBCP0CG48 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.71■□□□□ 0.27
UBCP0CG48 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.71■□□□□ 0.27
UBCP0CG48 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
UBCP0CG48 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.71■□□□□ 0.27
UBCP0CG48 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.71■□□□□ 0.27
UBCP0CG48 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
UBCP0CG48 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBCP0CG48 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms