Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SP9P0CG40 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.81■□□□□ 0.6
SP9P0CG40 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.81■□□□□ 0.6
SP9P0CG40 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
SP9P0CG40 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SP9P0CG40 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SP9P0CG40 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SP9P0CG40 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 AF106564.1-201ENST00000607058 2553 ntBASIC18.8■□□□□ 0.6
SP9P0CG40 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SP9P0CG40 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.8■□□□□ 0.6
SP9P0CG40 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SP9P0CG40 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.8■□□□□ 0.6
SP9P0CG40 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.8■□□□□ 0.6
SP9P0CG40 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.8■□□□□ 0.6
SP9P0CG40 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.8■□□□□ 0.6
SP9P0CG40 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.8■□□□□ 0.6
SP9P0CG40 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 LINC02084-201ENST00000606069 1096 ntBASIC18.8■□□□□ 0.6
SP9P0CG40 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.8■□□□□ 0.6
SP9P0CG40 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.8■□□□□ 0.6
SP9P0CG40 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.8■□□□□ 0.6
SP9P0CG40 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.8■□□□□ 0.6
SP9P0CG40 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.8■□□□□ 0.6
SP9P0CG40 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SP9P0CG40 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP9P0CG40 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SP9P0CG40 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.79■□□□□ 0.6
SP9P0CG40 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SP9P0CG40 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.79■□□□□ 0.6
SP9P0CG40 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SP9P0CG40 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP9P0CG40 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SP9P0CG40 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SP9P0CG40 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SP9P0CG40 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP9P0CG40 MIR940-201ENST00000401276 94 ntBASIC18.79■□□□□ 0.6
SP9P0CG40 NUS1P2-201ENST00000417358 873 ntBASIC18.79■□□□□ 0.6
SP9P0CG40 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP9P0CG40 AC005104.2-201ENST00000427818 678 ntBASIC18.79■□□□□ 0.6
SP9P0CG40 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.79■□□□□ 0.6
SP9P0CG40 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.79■□□□□ 0.6
SP9P0CG40 AC093909.1-201ENST00000504731 1122 ntBASIC18.79■□□□□ 0.6
SP9P0CG40 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.79■□□□□ 0.6
SP9P0CG40 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.79■□□□□ 0.6
SP9P0CG40 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.79■□□□□ 0.6
SP9P0CG40 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.79■□□□□ 0.6
SP9P0CG40 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.79■□□□□ 0.6
SP9P0CG40 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.79■□□□□ 0.6
SP9P0CG40 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SP9P0CG40 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SP9P0CG40 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP9P0CG40 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SP9P0CG40 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP9P0CG40 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
SP9P0CG40 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP9P0CG40 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SP9P0CG40 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SP9P0CG40 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.78■□□□□ 0.6
SP9P0CG40 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP9P0CG40 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP9P0CG40 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SP9P0CG40 KRT18P67-201ENST00000432816 1264 ntBASIC18.78■□□□□ 0.6
SP9P0CG40 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.78■□□□□ 0.6
SP9P0CG40 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.78■□□□□ 0.6
SP9P0CG40 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SP9P0CG40 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP9P0CG40 NSUN5P1-202ENST00000421140 1535 ntBASIC18.78■□□□□ 0.6
SP9P0CG40 NSUN5P2-203ENST00000457352 1529 ntBASIC18.78■□□□□ 0.6
SP9P0CG40 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SP9P0CG40 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SP9P0CG40 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.77■□□□□ 0.6
SP9P0CG40 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.77■□□□□ 0.6
SP9P0CG40 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.77■□□□□ 0.6
SP9P0CG40 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP9P0CG40 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP9P0CG40 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP9P0CG40 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.77■□□□□ 0.6
SP9P0CG40 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP9P0CG40 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.77■□□□□ 0.6
SP9P0CG40 AF186996.4-201ENST00000467186 377 ntBASIC18.77■□□□□ 0.6
SP9P0CG40 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.77■□□□□ 0.6
SP9P0CG40 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.77■□□□□ 0.6
SP9P0CG40 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.77■□□□□ 0.6
SP9P0CG40 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SP9P0CG40 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SP9P0CG40 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP9P0CG40 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SP9P0CG40 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms