Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A2P08572 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.25■□□□□ 0.67
COL4A2P08572 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A2P08572 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A2P08572 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.25■□□□□ 0.67
COL4A2P08572 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A2P08572 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL4A2P08572 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
COL4A2P08572 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.24■□□□□ 0.67
COL4A2P08572 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.24■□□□□ 0.67
COL4A2P08572 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.24■□□□□ 0.67
COL4A2P08572 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL4A2P08572 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.24■□□□□ 0.67
COL4A2P08572 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
COL4A2P08572 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.24■□□□□ 0.67
COL4A2P08572 AC011498.5-201ENST00000592027 486 ntBASIC19.24■□□□□ 0.67
COL4A2P08572 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
COL4A2P08572 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL4A2P08572 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL4A2P08572 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL4A2P08572 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL4A2P08572 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.23■□□□□ 0.67
COL4A2P08572 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
COL4A2P08572 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL4A2P08572 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL4A2P08572 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.23■□□□□ 0.67
COL4A2P08572 FAAHP1-202ENST00000446499 1238 ntBASIC19.23■□□□□ 0.67
COL4A2P08572 AC009078.2-202ENST00000463353 338 ntBASIC19.23■□□□□ 0.67
COL4A2P08572 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL4A2P08572 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.23■□□□□ 0.67
COL4A2P08572 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.23■□□□□ 0.67
COL4A2P08572 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.23■□□□□ 0.67
COL4A2P08572 KRT8P3-201ENST00000519669 1449 ntBASIC19.23■□□□□ 0.67
COL4A2P08572 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.23■□□□□ 0.67
COL4A2P08572 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.23■□□□□ 0.67
COL4A2P08572 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL4A2P08572 AL137060.1-201ENST00000618151 2648 ntBASIC19.23■□□□□ 0.67
COL4A2P08572 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.22■□□□□ 0.67
COL4A2P08572 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 MIR662-201ENST00000384847 95 ntBASIC19.22■□□□□ 0.67
COL4A2P08572 TSPY19P-201ENST00000418461 509 ntBASIC19.22■□□□□ 0.67
COL4A2P08572 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.22■□□□□ 0.67
COL4A2P08572 TSPY18P-201ENST00000441642 509 ntBASIC19.22■□□□□ 0.67
COL4A2P08572 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.22■□□□□ 0.67
COL4A2P08572 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.22■□□□□ 0.67
COL4A2P08572 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.22■□□□□ 0.67
COL4A2P08572 AC104692.2-201ENST00000603054 253 ntBASIC19.22■□□□□ 0.67
COL4A2P08572 AL671883.3-201ENST00000603274 991 ntBASIC19.22■□□□□ 0.67
COL4A2P08572 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.22■□□□□ 0.67
COL4A2P08572 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
COL4A2P08572 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.22■□□□□ 0.67
COL4A2P08572 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.22■□□□□ 0.67
COL4A2P08572 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
COL4A2P08572 TSPY22P-201ENST00000427496 604 ntBASIC19.22■□□□□ 0.67
COL4A2P08572 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.22■□□□□ 0.67
COL4A2P08572 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
COL4A2P08572 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.22■□□□□ 0.67
COL4A2P08572 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL4A2P08572 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL4A2P08572 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.21■□□□□ 0.67
COL4A2P08572 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL4A2P08572 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
COL4A2P08572 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.21■□□□□ 0.67
COL4A2P08572 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COL4A2P08572 AL845331.1-201ENST00000424978 1190 ntBASIC19.21■□□□□ 0.67
COL4A2P08572 TOB2P1-201ENST00000469761 992 ntBASIC19.21■□□□□ 0.67
COL4A2P08572 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.21■□□□□ 0.67
COL4A2P08572 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL4A2P08572 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.21■□□□□ 0.67
COL4A2P08572 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COL4A2P08572 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
COL4A2P08572 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL4A2P08572 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.21■□□□□ 0.67
COL4A2P08572 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms