Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.15■□□□□ 0.34
HLA-DPB1P04440 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 PCDHB18P-201ENST00000524813 2368 ntBASIC17.15■□□□□ 0.34
HLA-DPB1P04440 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 AC069152.1-201ENST00000438030 544 ntBASIC17.15■□□□□ 0.34
HLA-DPB1P04440 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 AC142086.2-201ENST00000569753 217 ntBASIC17.15■□□□□ 0.34
HLA-DPB1P04440 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 AL354751.1-201ENST00000412768 1863 ntBASIC17.15■□□□□ 0.34
HLA-DPB1P04440 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DPB1P04440 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HLA-DPB1P04440 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HLA-DPB1P04440 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 AC097658.1-201ENST00000475555 843 ntBASIC17.14■□□□□ 0.33
HLA-DPB1P04440 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 AC133041.1-202ENST00000642053 222 ntBASIC17.14■□□□□ 0.33
HLA-DPB1P04440 NOC2LP1-202ENST00000452600 2235 ntBASIC17.14■□□□□ 0.33
HLA-DPB1P04440 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 AC020916.1-201ENST00000587762 1774 ntBASIC17.14■□□□□ 0.33
HLA-DPB1P04440 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
HLA-DPB1P04440 NOC2LP2-201ENST00000407594 1944 ntBASIC17.13■□□□□ 0.33
HLA-DPB1P04440 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 LTB4R2-202ENST00000528054 3092 ntBASIC17.13■□□□□ 0.33
HLA-DPB1P04440 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
HLA-DPB1P04440 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms