Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18■□□□□ 0.47
MT-ND1P03886 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
MT-ND1P03886 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
MT-ND1P03886 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18■□□□□ 0.47
MT-ND1P03886 AC080038.1-201ENST00000611274 1154 ntBASIC18■□□□□ 0.47
MT-ND1P03886 AC092437.1-201ENST00000624794 1048 ntBASIC18■□□□□ 0.47
MT-ND1P03886 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18■□□□□ 0.47
MT-ND1P03886 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18■□□□□ 0.47
MT-ND1P03886 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
MT-ND1P03886 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 AC067852.2-201ENST00000590513 2313 ntBASIC18■□□□□ 0.47
MT-ND1P03886 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18■□□□□ 0.47
MT-ND1P03886 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
MT-ND1P03886 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.99■□□□□ 0.47
MT-ND1P03886 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
MT-ND1P03886 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.99■□□□□ 0.47
MT-ND1P03886 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.99■□□□□ 0.47
MT-ND1P03886 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.99■□□□□ 0.47
MT-ND1P03886 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.99■□□□□ 0.47
MT-ND1P03886 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 AC073111.5-205ENST00000641717 521 ntBASIC17.99■□□□□ 0.47
MT-ND1P03886 IRX1P1-201ENST00000438849 1838 ntBASIC17.99■□□□□ 0.47
MT-ND1P03886 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND1P03886 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.99■□□□□ 0.47
MT-ND1P03886 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.98■□□□□ 0.47
MT-ND1P03886 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.98■□□□□ 0.47
MT-ND1P03886 AP000997.3-201ENST00000623333 2250 ntBASIC17.98■□□□□ 0.47
MT-ND1P03886 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
MT-ND1P03886 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MT-ND1P03886 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.98■□□□□ 0.47
MT-ND1P03886 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MT-ND1P03886 NOC2LP2-201ENST00000407594 1944 ntBASIC17.98■□□□□ 0.47
MT-ND1P03886 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-ND1P03886 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-ND1P03886 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
MT-ND1P03886 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-ND1P03886 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.98■□□□□ 0.47
MT-ND1P03886 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.98■□□□□ 0.47
MT-ND1P03886 LSM12P1-201ENST00000411836 588 ntBASIC17.98■□□□□ 0.47
MT-ND1P03886 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.98■□□□□ 0.47
MT-ND1P03886 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.98■□□□□ 0.47
MT-ND1P03886 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.98■□□□□ 0.47
MT-ND1P03886 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MT-ND1P03886 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.98■□□□□ 0.47
MT-ND1P03886 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-ND1P03886 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-ND1P03886 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-ND1P03886 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
MT-ND1P03886 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
MT-ND1P03886 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
MT-ND1P03886 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MT-ND1P03886 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.97■□□□□ 0.47
MT-ND1P03886 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.97■□□□□ 0.47
MT-ND1P03886 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 IKBKGP1-201ENST00000612193 1073 ntBASIC17.97■□□□□ 0.47
MT-ND1P03886 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.97■□□□□ 0.47
MT-ND1P03886 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MT-ND1P03886 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MT-ND1P03886 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
MT-ND1P03886 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MT-ND1P03886 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
MT-ND1P03886 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MT-ND1P03886 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
MT-ND1P03886 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms