Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.49■□□□□ 0.55
KRT6AP02538 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.49■□□□□ 0.55
KRT6AP02538 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
KRT6AP02538 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.49■□□□□ 0.55
KRT6AP02538 C1QL1P1-201ENST00000568105 661 ntBASIC18.49■□□□□ 0.55
KRT6AP02538 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
KRT6AP02538 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.49■□□□□ 0.55
KRT6AP02538 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.49■□□□□ 0.55
KRT6AP02538 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.49■□□□□ 0.55
KRT6AP02538 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
KRT6AP02538 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT6AP02538 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT6AP02538 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT6AP02538 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT6AP02538 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT6AP02538 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.48■□□□□ 0.55
KRT6AP02538 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT6AP02538 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT6AP02538 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT6AP02538 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
KRT6AP02538 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.48■□□□□ 0.55
KRT6AP02538 AC026366.1-201ENST00000488803 879 ntBASIC18.48■□□□□ 0.55
KRT6AP02538 AC069544.1-201ENST00000609399 999 ntBASIC18.48■□□□□ 0.55
KRT6AP02538 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.48■□□□□ 0.55
KRT6AP02538 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT6AP02538 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
KRT6AP02538 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KRT6AP02538 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
KRT6AP02538 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT6AP02538 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT6AP02538 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT6AP02538 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KRT6AP02538 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT6AP02538 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
KRT6AP02538 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
KRT6AP02538 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT6AP02538 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
KRT6AP02538 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.47■□□□□ 0.55
KRT6AP02538 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.47■□□□□ 0.55
KRT6AP02538 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT6AP02538 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT6AP02538 AL160286.2-201ENST00000567150 934 ntBASIC18.47■□□□□ 0.55
KRT6AP02538 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.47■□□□□ 0.55
KRT6AP02538 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.47■□□□□ 0.55
KRT6AP02538 MTDHP1-201ENST00000605323 784 ntBASIC18.47■□□□□ 0.55
KRT6AP02538 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
KRT6AP02538 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.47■□□□□ 0.55
KRT6AP02538 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
KRT6AP02538 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
KRT6AP02538 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT6AP02538 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
KRT6AP02538 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
KRT6AP02538 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT6AP02538 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
KRT6AP02538 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.46■□□□□ 0.55
KRT6AP02538 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.46■□□□□ 0.55
KRT6AP02538 TSPY21P-201ENST00000433481 731 ntBASIC18.46■□□□□ 0.55
KRT6AP02538 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.46■□□□□ 0.55
KRT6AP02538 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
KRT6AP02538 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
KRT6AP02538 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.46■□□□□ 0.55
KRT6AP02538 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms