Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TIMP1P01033 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMP1P01033 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.66■□□□□ 0.9
TIMP1P01033 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP1P01033 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.65■□□□□ 0.9
TIMP1P01033 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP1P01033 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
TIMP1P01033 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.65■□□□□ 0.9
TIMP1P01033 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.65■□□□□ 0.9
TIMP1P01033 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TIMP1P01033 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP1P01033 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP1P01033 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP1P01033 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP1P01033 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP1P01033 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TIMP1P01033 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.65■□□□□ 0.9
TIMP1P01033 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.65■□□□□ 0.9
TIMP1P01033 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP1P01033 AC138894.3-201ENST00000603787 634 ntBASIC20.65■□□□□ 0.9
TIMP1P01033 AC120114.3-201ENST00000611923 658 ntBASIC20.65■□□□□ 0.9
TIMP1P01033 AC139530.3-201ENST00000620344 690 ntBASIC20.65■□□□□ 0.9
TIMP1P01033 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP1P01033 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TIMP1P01033 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.65■□□□□ 0.9
TIMP1P01033 AC020907.5-201ENST00000624372 1936 ntBASIC20.65■□□□□ 0.9
TIMP1P01033 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TIMP1P01033 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.64■□□□□ 0.9
TIMP1P01033 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TIMP1P01033 Z83836.1-201ENST00000624605 1642 ntBASIC20.64■□□□□ 0.9
TIMP1P01033 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.64■□□□□ 0.89
TIMP1P01033 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TIMP1P01033 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TIMP1P01033 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TIMP1P01033 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TIMP1P01033 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.64■□□□□ 0.89
TIMP1P01033 AC074051.2-201ENST00000565115 352 ntBASIC20.64■□□□□ 0.89
TIMP1P01033 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.64■□□□□ 0.89
TIMP1P01033 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.64■□□□□ 0.89
TIMP1P01033 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TIMP1P01033 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
TIMP1P01033 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TIMP1P01033 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TIMP1P01033 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TIMP1P01033 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP1P01033 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.63■□□□□ 0.89
TIMP1P01033 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP1P01033 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP1P01033 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.63■□□□□ 0.89
TIMP1P01033 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP1P01033 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP1P01033 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.63■□□□□ 0.89
TIMP1P01033 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP1P01033 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.63■□□□□ 0.89
TIMP1P01033 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.63■□□□□ 0.89
TIMP1P01033 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.63■□□□□ 0.89
TIMP1P01033 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP1P01033 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP1P01033 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.63■□□□□ 0.89
TIMP1P01033 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP1P01033 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMP1P01033 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.62■□□□□ 0.89
TIMP1P01033 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TIMP1P01033 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TIMP1P01033 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.62■□□□□ 0.89
TIMP1P01033 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TIMP1P01033 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TIMP1P01033 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TIMP1P01033 AL590627.1-203ENST00000421194 1026 ntBASIC20.62■□□□□ 0.89
TIMP1P01033 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.62■□□□□ 0.89
TIMP1P01033 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.62■□□□□ 0.89
TIMP1P01033 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TIMP1P01033 IGHV3-41-201ENST00000613121 348 ntBASIC20.62■□□□□ 0.89
TIMP1P01033 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.62■□□□□ 0.89
TIMP1P01033 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.62■□□□□ 0.89
TIMP1P01033 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMP1P01033 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.61■□□□□ 0.89
TIMP1P01033 ZNF815P-204ENST00000434898 1737 ntBASIC20.61■□□□□ 0.89
TIMP1P01033 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TIMP1P01033 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TIMP1P01033 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.61■□□□□ 0.89
TIMP1P01033 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMP1P01033 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMP1P01033 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.61■□□□□ 0.89
TIMP1P01033 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMP1P01033 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.61■□□□□ 0.89
TIMP1P01033 AC005332.3-201ENST00000589904 676 ntBASIC20.61■□□□□ 0.89
TIMP1P01033 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMP1P01033 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMP1P01033 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
TIMP1P01033 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
TIMP1P01033 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TIMP1P01033 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TIMP1P01033 AC233702.3-201ENST00000578656 1387 ntBASIC20.6■□□□□ 0.89
TIMP1P01033 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.6■□□□□ 0.89
TIMP1P01033 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TIMP1P01033 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.6■□□□□ 0.89
TIMP1P01033 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TIMP1P01033 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms