Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.97■□□□□ 0.15
SIX6O95475 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
SIX6O95475 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SIX6O95475 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SIX6O95475 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.97■□□□□ 0.15
SIX6O95475 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SIX6O95475 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.97■□□□□ 0.15
SIX6O95475 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.97■□□□□ 0.15
SIX6O95475 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.97■□□□□ 0.15
SIX6O95475 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.97■□□□□ 0.15
SIX6O95475 AC008764.7-201ENST00000593779 1081 ntBASIC15.97■□□□□ 0.15
SIX6O95475 TPRG1LP1-201ENST00000598702 760 ntBASIC15.97■□□□□ 0.15
SIX6O95475 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 AL355001.2-201ENST00000620617 1191 ntBASIC15.97■□□□□ 0.15
SIX6O95475 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SIX6O95475 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.97■□□□□ 0.15
SIX6O95475 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.97■□□□□ 0.15
SIX6O95475 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
SIX6O95475 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.97■□□□□ 0.15
SIX6O95475 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIX6O95475 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.97■□□□□ 0.15
SIX6O95475 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.97■□□□□ 0.15
SIX6O95475 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
SIX6O95475 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.96■□□□□ 0.15
SIX6O95475 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.96■□□□□ 0.15
SIX6O95475 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.96■□□□□ 0.15
SIX6O95475 AC073592.3-201ENST00000625118 1834 ntBASIC15.96■□□□□ 0.15
SIX6O95475 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.96■□□□□ 0.15
SIX6O95475 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 RBM17P2-201ENST00000616397 1405 ntBASIC15.96■□□□□ 0.15
SIX6O95475 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.96■□□□□ 0.15
SIX6O95475 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.96■□□□□ 0.15
SIX6O95475 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.96■□□□□ 0.15
SIX6O95475 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.96■□□□□ 0.15
SIX6O95475 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.96■□□□□ 0.15
SIX6O95475 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.96■□□□□ 0.15
SIX6O95475 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.96■□□□□ 0.15
SIX6O95475 AC134043.2-201ENST00000624206 2238 ntBASIC15.96■□□□□ 0.15
SIX6O95475 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SIX6O95475 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIX6O95475 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.96■□□□□ 0.15
SIX6O95475 AC080080.1-201ENST00000625121 2420 ntBASIC15.96■□□□□ 0.15
SIX6O95475 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.96■□□□□ 0.14
SIX6O95475 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
SIX6O95475 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.96■□□□□ 0.14
SIX6O95475 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SIX6O95475 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.95■□□□□ 0.14
SIX6O95475 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.95■□□□□ 0.14
SIX6O95475 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIX6O95475 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIX6O95475 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIX6O95475 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SIX6O95475 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIX6O95475 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIX6O95475 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIX6O95475 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
SIX6O95475 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIX6O95475 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SIX6O95475 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SIX6O95475 MIR572-201ENST00000384983 95 ntBASIC15.95■□□□□ 0.14
SIX6O95475 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.95■□□□□ 0.14
SIX6O95475 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.95■□□□□ 0.14
SIX6O95475 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.95■□□□□ 0.14
SIX6O95475 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.95■□□□□ 0.14
SIX6O95475 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.95■□□□□ 0.14
SIX6O95475 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms