Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AP005901.3-202ENST00000581653 237 ntBASIC28.64■■■□□ 2.18
RAPGEF3O95398 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC28.64■■■□□ 2.18
RAPGEF3O95398 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
RAPGEF3O95398 PMS2P7-201ENST00000506558 1336 ntBASIC28.64■■■□□ 2.17
RAPGEF3O95398 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC28.64■■■□□ 2.17
RAPGEF3O95398 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF3O95398 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF3O95398 BID-212ENST00000614949 1988 ntTSL 5 BASIC28.63■■■□□ 2.17
RAPGEF3O95398 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF3O95398 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
RAPGEF3O95398 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC28.63■■■□□ 2.17
RAPGEF3O95398 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC28.63■■■□□ 2.17
RAPGEF3O95398 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC28.63■■■□□ 2.17
RAPGEF3O95398 CCNC-219ENST00000627680 896 ntTSL 5 BASIC28.63■■■□□ 2.17
RAPGEF3O95398 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
RAPGEF3O95398 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF3O95398 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
RAPGEF3O95398 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF3O95398 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF3O95398 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF3O95398 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF3O95398 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF3O95398 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF3O95398 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF3O95398 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF3O95398 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF3O95398 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC28.62■■■□□ 2.17
RAPGEF3O95398 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF3O95398 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF3O95398 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF3O95398 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF3O95398 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC28.62■■■□□ 2.17
RAPGEF3O95398 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF3O95398 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF3O95398 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC28.61■■■□□ 2.17
RAPGEF3O95398 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF3O95398 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF3O95398 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC28.61■■■□□ 2.17
RAPGEF3O95398 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF3O95398 AC005104.2-201ENST00000427818 678 ntBASIC28.61■■■□□ 2.17
RAPGEF3O95398 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC28.61■■■□□ 2.17
RAPGEF3O95398 MCCD1P1-208ENST00000445732 328 ntBASIC28.61■■■□□ 2.17
RAPGEF3O95398 RNPS1P1-201ENST00000507437 918 ntBASIC28.61■■■□□ 2.17
RAPGEF3O95398 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF3O95398 RPL18-209ENST00000550645 463 ntTSL 5 BASIC28.61■■■□□ 2.17
RAPGEF3O95398 RPL18-214ENST00000552588 559 ntTSL 3 BASIC28.61■■■□□ 2.17
RAPGEF3O95398 AC009065.1-201ENST00000564055 1225 ntBASIC28.61■■■□□ 2.17
RAPGEF3O95398 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC28.61■■■□□ 2.17
RAPGEF3O95398 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
RAPGEF3O95398 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF3O95398 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF3O95398 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
RAPGEF3O95398 AC022898.2-201ENST00000616822 1312 ntBASIC28.61■■■□□ 2.17
RAPGEF3O95398 GOLGA2P11-201ENST00000562660 1621 ntBASIC28.61■■■□□ 2.17
RAPGEF3O95398 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC28.61■■■□□ 2.17
RAPGEF3O95398 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RAPGEF3O95398 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
RAPGEF3O95398 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC28.6■■■□□ 2.17
RAPGEF3O95398 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
RAPGEF3O95398 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RAPGEF3O95398 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC28.6■■■□□ 2.17
RAPGEF3O95398 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC28.6■■■□□ 2.17
RAPGEF3O95398 AC091607.1-201ENST00000490318 1060 ntBASIC28.6■■■□□ 2.17
RAPGEF3O95398 AL355385.1-201ENST00000606123 409 ntBASIC28.6■■■□□ 2.17
RAPGEF3O95398 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RAPGEF3O95398 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RAPGEF3O95398 NSUN5P1-202ENST00000421140 1535 ntBASIC28.59■■■□□ 2.17
RAPGEF3O95398 NSUN5P2-203ENST00000457352 1529 ntBASIC28.59■■■□□ 2.17
RAPGEF3O95398 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RAPGEF3O95398 MIR940-201ENST00000401276 94 ntBASIC28.59■■■□□ 2.17
RAPGEF3O95398 NUS1P2-201ENST00000417358 873 ntBASIC28.59■■■□□ 2.17
RAPGEF3O95398 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
RAPGEF3O95398 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC28.59■■■□□ 2.17
RAPGEF3O95398 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC28.59■■■□□ 2.17
RAPGEF3O95398 TERC-201ENST00000602385 541 ntBASIC28.59■■■□□ 2.17
RAPGEF3O95398 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RAPGEF3O95398 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RAPGEF3O95398 AC104417.2-201ENST00000562989 1793 ntBASIC28.59■■■□□ 2.17
RAPGEF3O95398 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
RAPGEF3O95398 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
RAPGEF3O95398 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC28.59■■■□□ 2.17
RAPGEF3O95398 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
RAPGEF3O95398 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
RAPGEF3O95398 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
RAPGEF3O95398 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RAPGEF3O95398 MED22-202ENST00000371999 987 ntTSL 3 BASIC28.58■■■□□ 2.17
RAPGEF3O95398 GGCT-205ENST00000409436 954 ntTSL 3 BASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms