Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF4O60810 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF4O60810 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF4O60810 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEF4O60810 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF4O60810 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF4O60810 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF4O60810 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF4O60810 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF4O60810 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PRAMEF4O60810 FAM197Y1-201ENST00000421178 764 ntBASIC18.36■□□□□ 0.53
PRAMEF4O60810 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRAMEF4O60810 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.36■□□□□ 0.53
PRAMEF4O60810 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF4O60810 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.36■□□□□ 0.53
PRAMEF4O60810 RNF165-205ENST00000588679 2904 ntBASIC18.36■□□□□ 0.53
PRAMEF4O60810 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF4O60810 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.36■□□□□ 0.53
PRAMEF4O60810 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEF4O60810 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PRAMEF4O60810 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEF4O60810 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEF4O60810 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF4O60810 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.35■□□□□ 0.53
PRAMEF4O60810 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF4O60810 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRAMEF4O60810 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.35■□□□□ 0.53
PRAMEF4O60810 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.35■□□□□ 0.53
PRAMEF4O60810 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.35■□□□□ 0.53
PRAMEF4O60810 AC130371.2-201ENST00000619443 611 ntBASIC18.35■□□□□ 0.53
PRAMEF4O60810 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRAMEF4O60810 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRAMEF4O60810 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 UBE2SP1-201ENST00000450587 669 ntBASIC18.34■□□□□ 0.53
PRAMEF4O60810 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRAMEF4O60810 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.34■□□□□ 0.53
PRAMEF4O60810 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.33■□□□□ 0.53
PRAMEF4O60810 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF4O60810 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PRAMEF4O60810 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF4O60810 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF4O60810 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.33■□□□□ 0.53
PRAMEF4O60810 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF4O60810 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF4O60810 AL031598.1-201ENST00000561511 1773 ntBASIC18.33■□□□□ 0.53
PRAMEF4O60810 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF4O60810 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRAMEF4O60810 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEF4O60810 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF4O60810 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEF4O60810 RPS2P55-201ENST00000397318 883 ntBASIC18.33■□□□□ 0.52
PRAMEF4O60810 AC004951.3-201ENST00000418645 1148 ntBASIC18.33■□□□□ 0.52
PRAMEF4O60810 B3GAT3P1-201ENST00000471720 806 ntBASIC18.33■□□□□ 0.52
PRAMEF4O60810 AC107956.1-201ENST00000494359 873 ntBASIC18.33■□□□□ 0.52
PRAMEF4O60810 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF4O60810 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEF4O60810 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.33■□□□□ 0.52
PRAMEF4O60810 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF4O60810 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PRAMEF4O60810 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PRAMEF4O60810 Z99916.2-201ENST00000604037 246 ntBASIC18.33■□□□□ 0.52
PRAMEF4O60810 CD177P1-201ENST00000606252 935 ntBASIC18.33■□□□□ 0.52
PRAMEF4O60810 AC113410.3-201ENST00000623366 203 ntBASIC18.33■□□□□ 0.52
PRAMEF4O60810 AL031985.4-201ENST00000642138 673 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms