Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.56■□□□□ 0.56
GFRA3O60609 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GFRA3O60609 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GFRA3O60609 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
GFRA3O60609 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.56■□□□□ 0.56
GFRA3O60609 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GFRA3O60609 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
GFRA3O60609 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.55■□□□□ 0.56
GFRA3O60609 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
GFRA3O60609 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GFRA3O60609 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.55■□□□□ 0.56
GFRA3O60609 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GFRA3O60609 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.55■□□□□ 0.56
GFRA3O60609 HNRNPDP1-201ENST00000439535 754 ntBASIC18.55■□□□□ 0.56
GFRA3O60609 PAWRP1-201ENST00000451083 565 ntBASIC18.55■□□□□ 0.56
GFRA3O60609 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.55■□□□□ 0.56
GFRA3O60609 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.55■□□□□ 0.56
GFRA3O60609 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.55■□□□□ 0.56
GFRA3O60609 GUSBP12-201ENST00000513727 720 ntBASIC18.55■□□□□ 0.56
GFRA3O60609 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.55■□□□□ 0.56
GFRA3O60609 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.55■□□□□ 0.56
GFRA3O60609 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.55■□□□□ 0.56
GFRA3O60609 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.55■□□□□ 0.56
GFRA3O60609 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
GFRA3O60609 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GFRA3O60609 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 DPP3P2-201ENST00000416030 1696 ntBASIC18.54■□□□□ 0.56
GFRA3O60609 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.54■□□□□ 0.56
GFRA3O60609 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.54■□□□□ 0.56
GFRA3O60609 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.54■□□□□ 0.56
GFRA3O60609 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.54■□□□□ 0.56
GFRA3O60609 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.54■□□□□ 0.56
GFRA3O60609 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.54■□□□□ 0.56
GFRA3O60609 AC034105.1-201ENST00000563488 319 ntBASIC18.54■□□□□ 0.56
GFRA3O60609 AP005901.3-202ENST00000581653 237 ntBASIC18.54■□□□□ 0.56
GFRA3O60609 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GFRA3O60609 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.54■□□□□ 0.56
GFRA3O60609 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
GFRA3O60609 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GFRA3O60609 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GFRA3O60609 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
GFRA3O60609 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GFRA3O60609 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GFRA3O60609 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.53■□□□□ 0.56
GFRA3O60609 AC004832.2-201ENST00000426397 482 ntBASIC18.53■□□□□ 0.56
GFRA3O60609 AL645939.2-201ENST00000427340 991 ntBASIC18.53■□□□□ 0.56
GFRA3O60609 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.53■□□□□ 0.56
GFRA3O60609 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GFRA3O60609 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GFRA3O60609 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GFRA3O60609 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.53■□□□□ 0.56
GFRA3O60609 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.53■□□□□ 0.56
GFRA3O60609 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.53■□□□□ 0.56
GFRA3O60609 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
GFRA3O60609 AC002347.1-201ENST00000569543 541 ntBASIC18.53■□□□□ 0.56
GFRA3O60609 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.53■□□□□ 0.56
GFRA3O60609 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GFRA3O60609 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
GFRA3O60609 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.53■□□□□ 0.56
GFRA3O60609 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GFRA3O60609 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GFRA3O60609 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
GFRA3O60609 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GFRA3O60609 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GFRA3O60609 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GFRA3O60609 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GFRA3O60609 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GFRA3O60609 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.52■□□□□ 0.56
GFRA3O60609 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.52■□□□□ 0.56
GFRA3O60609 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.52■□□□□ 0.56
GFRA3O60609 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.52■□□□□ 0.56
GFRA3O60609 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GFRA3O60609 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
GFRA3O60609 SNHG9-202ENST00000564014 471 ntBASIC18.52■□□□□ 0.56
GFRA3O60609 MIR5100-201ENST00000579544 119 ntBASIC18.52■□□□□ 0.56
GFRA3O60609 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms