Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LCMT2O60294 FP475955.4-201ENST00000623131 1990 ntBASIC18.26■□□□□ 0.51
LCMT2O60294 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LCMT2O60294 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
LCMT2O60294 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.26■□□□□ 0.51
LCMT2O60294 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.26■□□□□ 0.51
LCMT2O60294 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.26■□□□□ 0.51
LCMT2O60294 SLC25A1P4-201ENST00000567977 778 ntBASIC18.26■□□□□ 0.51
LCMT2O60294 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LCMT2O60294 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LCMT2O60294 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
LCMT2O60294 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LCMT2O60294 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.25■□□□□ 0.51
LCMT2O60294 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.25■□□□□ 0.51
LCMT2O60294 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LCMT2O60294 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 UNC93B2-201ENST00000285383 730 ntBASIC18.25■□□□□ 0.51
LCMT2O60294 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LCMT2O60294 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LCMT2O60294 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LCMT2O60294 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.25■□□□□ 0.51
LCMT2O60294 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 CKBP1-201ENST00000565489 1086 ntBASIC18.25■□□□□ 0.51
LCMT2O60294 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.25■□□□□ 0.51
LCMT2O60294 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.25■□□□□ 0.51
LCMT2O60294 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.25■□□□□ 0.51
LCMT2O60294 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
LCMT2O60294 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LCMT2O60294 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.25■□□□□ 0.51
LCMT2O60294 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCMT2O60294 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.25■□□□□ 0.51
LCMT2O60294 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.24■□□□□ 0.51
LCMT2O60294 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LCMT2O60294 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.24■□□□□ 0.51
LCMT2O60294 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.24■□□□□ 0.51
LCMT2O60294 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LCMT2O60294 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
LCMT2O60294 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LCMT2O60294 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.24■□□□□ 0.51
LCMT2O60294 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.24■□□□□ 0.51
LCMT2O60294 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.24■□□□□ 0.51
LCMT2O60294 PRSS44-201ENST00000515154 1146 ntBASIC18.24■□□□□ 0.51
LCMT2O60294 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 AP000525.1-201ENST00000608286 694 ntBASIC18.24■□□□□ 0.51
LCMT2O60294 DGCR10-201ENST00000609839 495 ntBASIC18.24■□□□□ 0.51
LCMT2O60294 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.24■□□□□ 0.51
LCMT2O60294 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.24■□□□□ 0.51
LCMT2O60294 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
LCMT2O60294 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCMT2O60294 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.24■□□□□ 0.51
LCMT2O60294 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.24■□□□□ 0.51
LCMT2O60294 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.23■□□□□ 0.51
LCMT2O60294 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
LCMT2O60294 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LCMT2O60294 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCMT2O60294 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LCMT2O60294 CRYGFP-201ENST00000418459 633 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms