Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN5O00501 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN5O00501 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN5O00501 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN5O00501 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN5O00501 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN5O00501 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN5O00501 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CLDN5O00501 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN5O00501 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN5O00501 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.14■□□□□ 0.81
CLDN5O00501 AC092338.2-201ENST00000568827 1415 ntBASIC20.14■□□□□ 0.81
CLDN5O00501 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN5O00501 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.14■□□□□ 0.81
CLDN5O00501 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.14■□□□□ 0.81
CLDN5O00501 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN5O00501 CCR12P-201ENST00000446203 998 ntBASIC20.14■□□□□ 0.81
CLDN5O00501 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.14■□□□□ 0.81
CLDN5O00501 AC010203.1-204ENST00000548782 407 ntBASIC20.14■□□□□ 0.81
CLDN5O00501 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN5O00501 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN5O00501 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLDN5O00501 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN5O00501 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN5O00501 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN5O00501 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLDN5O00501 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN5O00501 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN5O00501 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN5O00501 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN5O00501 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDN5O00501 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN5O00501 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN5O00501 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN5O00501 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN5O00501 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.13■□□□□ 0.81
CLDN5O00501 KRT18P57-201ENST00000443599 1254 ntBASIC20.13■□□□□ 0.81
CLDN5O00501 AC128688.1-201ENST00000487626 519 ntBASIC20.13■□□□□ 0.81
CLDN5O00501 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN5O00501 AL353719.1-201ENST00000566847 864 ntBASIC20.13■□□□□ 0.81
CLDN5O00501 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.13■□□□□ 0.81
CLDN5O00501 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CLDN5O00501 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN5O00501 AC141586.3-201ENST00000562166 1838 ntBASIC20.13■□□□□ 0.81
CLDN5O00501 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDN5O00501 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN5O00501 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN5O00501 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN5O00501 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDN5O00501 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN5O00501 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN5O00501 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN5O00501 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN5O00501 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN5O00501 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN5O00501 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CLDN5O00501 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.12■□□□□ 0.81
CLDN5O00501 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN5O00501 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN5O00501 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN5O00501 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN5O00501 AC113347.1-201ENST00000413321 391 ntBASIC20.12■□□□□ 0.81
CLDN5O00501 FAM210CP-201ENST00000445714 574 ntBASIC20.12■□□□□ 0.81
CLDN5O00501 CA15P1-201ENST00000481698 905 ntBASIC20.12■□□□□ 0.81
CLDN5O00501 RN7SL850P-201ENST00000579959 291 ntBASIC20.12■□□□□ 0.81
CLDN5O00501 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.12■□□□□ 0.81
CLDN5O00501 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDN5O00501 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN5O00501 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN5O00501 AC005332.7-201ENST00000614046 2005 ntBASIC20.12■□□□□ 0.81
CLDN5O00501 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN5O00501 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN5O00501 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN5O00501 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN5O00501 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CLDN5O00501 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CLDN5O00501 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.11■□□□□ 0.81
CLDN5O00501 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.11■□□□□ 0.81
CLDN5O00501 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN5O00501 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN5O00501 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN5O00501 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.11■□□□□ 0.81
CLDN5O00501 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN5O00501 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN5O00501 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CLDN5O00501 TERF1P1-201ENST00000311003 1181 ntBASIC20.11■□□□□ 0.81
CLDN5O00501 AP003041.3-201ENST00000527151 707 ntBASIC20.11■□□□□ 0.81
CLDN5O00501 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
CLDN5O00501 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CLDN5O00501 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
CLDN5O00501 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.11■□□□□ 0.81
CLDN5O00501 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN5O00501 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CLDN5O00501 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN5O00501 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
CLDN5O00501 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN5O00501 IRX1P1-201ENST00000438849 1838 ntBASIC20.11■□□□□ 0.81
CLDN5O00501 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN5O00501 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN5O00501 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms