Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.62■□□□□ 0.73
DFFAO00273 B3GAT3P1-201ENST00000471720 806 ntBASIC19.62■□□□□ 0.73
DFFAO00273 NUDT16P1-203ENST00000513809 620 ntBASIC19.62■□□□□ 0.73
DFFAO00273 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.62■□□□□ 0.73
DFFAO00273 AC026471.5-201ENST00000615068 467 ntBASIC19.62■□□□□ 0.73
DFFAO00273 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.62■□□□□ 0.73
DFFAO00273 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.62■□□□□ 0.73
DFFAO00273 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
DFFAO00273 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.62■□□□□ 0.73
DFFAO00273 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.62■□□□□ 0.73
DFFAO00273 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFAO00273 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
DFFAO00273 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.61■□□□□ 0.73
DFFAO00273 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
DFFAO00273 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
DFFAO00273 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
DFFAO00273 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DFFAO00273 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
DFFAO00273 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.61■□□□□ 0.73
DFFAO00273 TSPY21P-201ENST00000433481 731 ntBASIC19.61■□□□□ 0.73
DFFAO00273 TSPY23P-201ENST00000440136 739 ntBASIC19.61■□□□□ 0.73
DFFAO00273 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.61■□□□□ 0.73
DFFAO00273 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.61■□□□□ 0.73
DFFAO00273 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 AL161938.1-201ENST00000569833 2180 ntBASIC19.61■□□□□ 0.73
DFFAO00273 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
DFFAO00273 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.61■□□□□ 0.73
DFFAO00273 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.61■□□□□ 0.73
DFFAO00273 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.61■□□□□ 0.73
DFFAO00273 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFAO00273 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.6■□□□□ 0.73
DFFAO00273 FSCN1P1-201ENST00000568912 1481 ntBASIC19.6■□□□□ 0.73
DFFAO00273 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DFFAO00273 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.6■□□□□ 0.73
DFFAO00273 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DFFAO00273 IRX1P1-201ENST00000438849 1838 ntBASIC19.6■□□□□ 0.73
DFFAO00273 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.6■□□□□ 0.73
DFFAO00273 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.6■□□□□ 0.73
DFFAO00273 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
DFFAO00273 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
DFFAO00273 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.6■□□□□ 0.73
DFFAO00273 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DFFAO00273 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.6■□□□□ 0.73
DFFAO00273 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
DFFAO00273 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.6■□□□□ 0.73
DFFAO00273 AC008040.2-201ENST00000461049 708 ntBASIC19.6■□□□□ 0.73
DFFAO00273 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.6■□□□□ 0.73
DFFAO00273 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.6■□□□□ 0.73
DFFAO00273 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.6■□□□□ 0.73
DFFAO00273 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.6■□□□□ 0.73
DFFAO00273 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.6■□□□□ 0.73
DFFAO00273 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DFFAO00273 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.6■□□□□ 0.73
DFFAO00273 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
DFFAO00273 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DFFAO00273 AL049812.1-201ENST00000432563 2267 ntBASIC19.6■□□□□ 0.73
DFFAO00273 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.6■□□□□ 0.73
DFFAO00273 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DFFAO00273 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DFFAO00273 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.6■□□□□ 0.73
DFFAO00273 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.59■□□□□ 0.73
DFFAO00273 AC087289.5-201ENST00000586076 3175 ntBASIC19.59■□□□□ 0.73
DFFAO00273 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
DFFAO00273 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DFFAO00273 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
DFFAO00273 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DFFAO00273 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
DFFAO00273 MESTP1-201ENST00000404287 994 ntBASIC19.59■□□□□ 0.73
DFFAO00273 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.59■□□□□ 0.73
DFFAO00273 FAM207BP-201ENST00000447172 505 ntBASIC19.59■□□□□ 0.73
DFFAO00273 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.59■□□□□ 0.73
DFFAO00273 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.59■□□□□ 0.73
DFFAO00273 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
DFFAO00273 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.59■□□□□ 0.73
DFFAO00273 AC130371.2-201ENST00000619443 611 ntBASIC19.59■□□□□ 0.73
DFFAO00273 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DFFAO00273 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DFFAO00273 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DFFAO00273 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DFFAO00273 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
DFFAO00273 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.59■□□□□ 0.73
DFFAO00273 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms