Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 STARP1-201ENST00000397973 869 ntBASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 AL023284.2-201ENST00000405850 579 ntBASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 KRT18P38-201ENST00000449496 1282 ntBASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 GCSHP2-201ENST00000560971 527 ntBASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MBD3L5A6NJ08 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 AP000550.4-202ENST00000639755 178 ntBASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MBD3L5A6NJ08 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MBD3L5A6NJ08 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MBD3L5A6NJ08 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.77■□□□□ 0.27
MBD3L5A6NJ08 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.77■□□□□ 0.27
MBD3L5A6NJ08 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MBD3L5A6NJ08 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.77■□□□□ 0.27
MBD3L5A6NJ08 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MBD3L5A6NJ08 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.77■□□□□ 0.27
MBD3L5A6NJ08 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MBD3L5A6NJ08 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 TEX21P-204ENST00000641479 1693 ntBASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 MCCD1P1-208ENST00000445732 328 ntBASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 FAM86EP-206ENST00000510506 987 ntBASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 MIR3180-5-201ENST00000583743 153 ntBASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MBD3L5A6NJ08 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MBD3L5A6NJ08 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms