Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 TNRC18P3-201ENST00000441896 2691 ntBASIC13.48□□□□□ -0.25
LINC01546A6NGU7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 MIR939-201ENST00000401314 82 ntBASIC13.48□□□□□ -0.25
LINC01546A6NGU7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 AL356441.2-201ENST00000443009 864 ntBASIC13.48□□□□□ -0.25
LINC01546A6NGU7 AC091305.1-201ENST00000479476 895 ntBASIC13.48□□□□□ -0.25
LINC01546A6NGU7 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 AC012313.1-201ENST00000593393 3059 ntBASIC13.48□□□□□ -0.25
LINC01546A6NGU7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 AC108860.2-201ENST00000562760 2183 ntBASIC13.48□□□□□ -0.25
LINC01546A6NGU7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC01546A6NGU7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 KRT18P68-201ENST00000392293 1000 ntBASIC13.47□□□□□ -0.25
LINC01546A6NGU7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 AC016405.3-201ENST00000607710 860 ntBASIC13.47□□□□□ -0.25
LINC01546A6NGU7 MIR6084-201ENST00000622012 110 ntBASIC13.47□□□□□ -0.25
LINC01546A6NGU7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC01546A6NGU7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 AC084018.2-201ENST00000613093 2607 ntBASIC13.46□□□□□ -0.25
LINC01546A6NGU7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LINC01546A6NGU7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms