Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.02□□□□□ -0.33
LINC00959A0A1B0GUT2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 SOX15-203ENST00000570788 1093 ntBASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 AC008687.6-201ENST00000596318 630 ntBASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 WIZP1-201ENST00000531444 2299 ntBASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LINC00959A0A1B0GUT2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 AC104581.1-202ENST00000635932 2618 ntBASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LINC00959A0A1B0GUT2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms