Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.07□□□□□ -2.24
AP4S1Q9Y587 AC008121.1-201ENST00000603244 268 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 AC073413.2-201ENST00000604332 360 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 AC012443.1-201ENST00000605605 231 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 AC068276.1-201ENST00000605793 379 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 AL445493.3-201ENST00000619568 477 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.07□□□□□ -2.24
AP4S1Q9Y587 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.07□□□□□ -2.24
AP4S1Q9Y587 AC087821.2-201ENST00000637086 450 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 LINC02211-204ENST00000642024 1070 ntBASIC1.07□□□□□ -2.24
AP4S1Q9Y587 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
AP4S1Q9Y587 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
AP4S1Q9Y587 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 RNU6-338P-201ENST00000383888 105 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 MIR513A1-201ENST00000385138 129 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 AL035405.1-201ENST00000400795 710 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 HMGB1P9-201ENST00000429856 646 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.06□□□□□ -2.24
AP4S1Q9Y587 Z85994.2-201ENST00000434327 452 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.06□□□□□ -2.24
AP4S1Q9Y587 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.06□□□□□ -2.24
AP4S1Q9Y587 AC092902.1-201ENST00000486999 259 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
AP4S1Q9Y587 AC008526.1-201ENST00000509149 338 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 LTV1P1-201ENST00000510683 1237 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 AC104057.1-201ENST00000515547 497 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 RNA5SP445-201ENST00000515889 115 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 RNU1-92P-201ENST00000517017 135 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
AP4S1Q9Y587 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.06□□□□□ -2.24
AP4S1Q9Y587 MIR3126-201ENST00000577443 74 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.06□□□□□ -2.24
AP4S1Q9Y587 FAM60CP-201ENST00000591086 664 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 AC022202.1-201ENST00000613515 211 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 AC108479.2-201ENST00000617314 601 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 MIR6852-201ENST00000621699 66 ntBASIC1.06□□□□□ -2.24
AP4S1Q9Y587 AC007785.2-201ENST00000598627 1916 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.05□□□□□ -2.24
AP4S1Q9Y587 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
AP4S1Q9Y587 SNORA62.1-201ENST00000364287 154 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 MTND4LP20-201ENST00000402379 270 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 AL356421.1-201ENST00000403255 413 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 RPL23AP76-201ENST00000441860 458 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 AC104629.2-201ENST00000468627 598 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 AC111193.1-201ENST00000504097 155 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.05□□□□□ -2.24
AP4S1Q9Y587 SCARNA3-201ENST00000517097 143 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.05□□□□□ -2.24
AP4S1Q9Y587 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.05□□□□□ -2.24
AP4S1Q9Y587 MIR4713-201ENST00000582691 75 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 BNIP3P25-201ENST00000596023 559 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 AP003476.1-201ENST00000623984 516 ntBASIC1.05□□□□□ -2.24
AP4S1Q9Y587 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.05□□□□□ -2.24
AP4S1Q9Y587 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.05□□□□□ -2.24
AP4S1Q9Y587 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
AP4S1Q9Y587 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.04□□□□□ -2.24
AP4S1Q9Y587 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.04□□□□□ -2.24
AP4S1Q9Y587 MIR1303-201ENST00000408625 86 ntBASIC1.04□□□□□ -2.24
AP4S1Q9Y587 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.04□□□□□ -2.24
AP4S1Q9Y587 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.04□□□□□ -2.24
AP4S1Q9Y587 TOMM22P2-201ENST00000430735 237 ntBASIC1.04□□□□□ -2.24
AP4S1Q9Y587 MTND6P13-201ENST00000443510 523 ntBASIC1.04□□□□□ -2.24
AP4S1Q9Y587 AP000926.3-201ENST00000497201 299 ntBASIC1.04□□□□□ -2.24
AP4S1Q9Y587 AC022447.1-201ENST00000515358 464 ntBASIC1.04□□□□□ -2.24
AP4S1Q9Y587 AC107953.1-201ENST00000522216 297 ntBASIC1.04□□□□□ -2.24
AP4S1Q9Y587 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.04□□□□□ -2.24
AP4S1Q9Y587 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.04□□□□□ -2.24
AP4S1Q9Y587 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
AP4S1Q9Y587 AC023043.2-201ENST00000589678 1026 ntBASIC1.04□□□□□ -2.24
AP4S1Q9Y587 AC018638.7-201ENST00000605836 1114 ntBASIC1.04□□□□□ -2.24
AP4S1Q9Y587 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.04□□□□□ -2.24
AP4S1Q9Y587 U4atac.1-201ENST00000618345 95 ntBASIC1.04□□□□□ -2.24
AP4S1Q9Y587 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
AP4S1Q9Y587 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
AP4S1Q9Y587 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
AP4S1Q9Y587 RNU4-91P-201ENST00000364778 135 ntBASIC1.03□□□□□ -2.24
AP4S1Q9Y587 SNORD26-201ENST00000384147 75 ntBASIC1.03□□□□□ -2.24
AP4S1Q9Y587 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.03□□□□□ -2.24
AP4S1Q9Y587 RPL12P25-201ENST00000455592 494 ntBASIC1.03□□□□□ -2.24
AP4S1Q9Y587 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.03□□□□□ -2.24
AP4S1Q9Y587 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.03□□□□□ -2.24
AP4S1Q9Y587 AL442163.2-201ENST00000553912 710 ntBASIC1.03□□□□□ -2.24
AP4S1Q9Y587 AL049870.4-201ENST00000555741 486 ntBASIC1.03□□□□□ -2.24
AP4S1Q9Y587 AC104763.3-201ENST00000613765 618 ntBASIC1.03□□□□□ -2.24
AP4S1Q9Y587 VN1R9P-201ENST00000614184 867 ntBASIC1.03□□□□□ -2.24
AP4S1Q9Y587 AC090132.2-201ENST00000615881 347 ntBASIC1.03□□□□□ -2.24
AP4S1Q9Y587 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.03□□□□□ -2.24
AP4S1Q9Y587 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.03□□□□□ -2.24
AP4S1Q9Y587 AC026634.1-201ENST00000634369 198 ntBASIC1.03□□□□□ -2.24
AP4S1Q9Y587 Z99571.1-201ENST00000636677 394 ntBASIC1.03□□□□□ -2.24
AP4S1Q9Y587 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
AP4S1Q9Y587 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
AP4S1Q9Y587 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
AP4S1Q9Y587 Y_RNA.500-201ENST00000384466 111 ntBASIC1.02□□□□□ -2.25
AP4S1Q9Y587 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
AP4S1Q9Y587 DDX3P2-201ENST00000446138 111 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms