Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 ABCC13-202ENST00000463099 3842 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 RPSAP50-201ENST00000481955 852 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 RPS21P4-201ENST00000487122 248 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 AC091912.1-201ENST00000511351 248 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 RNU6-919P-201ENST00000516731 104 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 RNA5SP230-201ENST00000517039 122 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 CASP1P1-201ENST00000526345 212 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 AC007458.1-201ENST00000542812 373 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 AC120057.2-201ENST00000571520 271 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 AC104581.2-201ENST00000572227 430 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 RN7SL652P-201ENST00000577769 300 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 MIR4646-201ENST00000580775 63 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 AC009318.2-201ENST00000610917 651 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 PCAT14-202ENST00000627127 3935 ntBASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CUEDC1Q9NWM3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 AC092681.1-201ENST00000297369 291 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 RNU6-153P-201ENST00000364422 104 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.275-201ENST00000364726 110 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 RNU1-77P-201ENST00000390868 162 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 RNU6-882P-201ENST00000391025 103 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.586-201ENST00000391146 98 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 AL133388.1-201ENST00000404509 287 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 GSTM5P1-201ENST00000434751 660 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 RN7SL197P-201ENST00000466981 299 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 RNU6-1219P-201ENST00000516143 112 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 RN7SKP258-201ENST00000517151 304 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 AP004607.2-201ENST00000533949 322 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 AC004852.3-201ENST00000614131 326 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 AL450472.3-201ENST00000615578 367 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 AC092376.2-201ENST00000622621 4116 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 AC114947.2-201ENST00000565748 2125 ntBASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CUEDC1Q9NWM3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 RN7SKP145-201ENST00000363291 303 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 RNU6-288P-201ENST00000363690 104 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 RNA5SP335-201ENST00000363817 110 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.272-201ENST00000364696 102 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 RNU6-44P-201ENST00000384045 107 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.488-201ENST00000384403 102 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 MIR765-201ENST00000390226 114 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 SNORA12.2-201ENST00000391040 156 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 RNU6-131P-201ENST00000391144 107 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 RN7SKP177-201ENST00000410567 355 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 AC068287.1-201ENST00000430283 295 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 BTF3P6-201ENST00000448054 499 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 AC008953.1-201ENST00000497334 318 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 AC098976.1-201ENST00000513014 541 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 SNRPGP16-201ENST00000533275 226 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 SNORD113-5-201ENST00000607261 78 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms