Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AC032011.1-201ENST00000611703 1549 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 RNU4-50P-201ENST00000364361 141 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 DEFB109C-201ENST00000382575 264 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 DEFB109B-201ENST00000382656 264 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 RNA5SP87-201ENST00000384155 118 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 SNORA51.11-201ENST00000384442 131 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 MIR550A3-201ENST00000390735 95 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 SNORA69.1-201ENST00000390904 137 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AL356968.1-201ENST00000416622 474 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 RBMY1KP-201ENST00000423480 476 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 ANP32BP2-201ENST00000454525 545 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AC092798.1-201ENST00000458542 409 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AC078899.3-201ENST00000599065 212 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 AL139395.1-201ENST00000603662 160 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.24□□□□□ -1.57
VRTNQ9H8Y1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AC104260.2-201ENST00000623551 3497 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 Y_RNA.222-201ENST00000364264 102 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 PPIAP31-201ENST00000405422 495 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 MIR1302-6-201ENST00000408466 90 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 RNA5SP129-201ENST00000410276 118 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 RN7SKP177-201ENST00000410567 355 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AC114755.2-201ENST00000413520 361 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AL159987.2-201ENST00000432754 307 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 Z82210.1-201ENST00000440037 231 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 snoU13.20-201ENST00000459180 104 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 RN7SL610P-201ENST00000463845 291 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 SNORA25.11-201ENST00000515935 105 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 RNU6-377P-201ENST00000515965 102 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 RNU2-53P-201ENST00000516257 147 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 RNA5SP468-201ENST00000516782 93 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 RNU6-612P-201ENST00000516909 102 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 MIR4737-201ENST00000583979 81 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 SRGNP1-201ENST00000603392 451 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AC004805.2-201ENST00000605382 482 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AC008962.1-201ENST00000605729 304 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRTNQ9H8Y1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 Y_RNA.257-201ENST00000364596 102 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 Y_RNA.461-201ENST00000384263 103 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 MIR628-201ENST00000385229 95 ntBASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VRTNQ9H8Y1 RNU6-1197P-201ENST00000391183 107 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms