Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 RNU6-1035P-201ENST00000384477 107 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 MIR9-1-201ENST00000385198 89 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AL139039.1-201ENST00000401900 692 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 U3.40-201ENST00000408706 208 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 SSR1P2-201ENST00000415208 787 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 MTND1P23-201ENST00000416931 372 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 USP9YP20-201ENST00000419224 558 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AC018630.2-202ENST00000422992 927 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 DPPA3P1-201ENST00000448050 469 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 SNORD121B-201ENST00000458838 81 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 RPS27P21-201ENST00000486977 252 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AC096725.1-201ENST00000514266 313 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AC087276.1-201ENST00000529659 480 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 MIR6130-201ENST00000619419 109 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AL031601.2-202ENST00000622650 282 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AC011477.1-204ENST00000623416 1325 ntBASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.62□□□□□ -1.99
SUDS3Q9H7L9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 RNU6-97P-201ENST00000363387 104 ntBASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 RNU6-359P-201ENST00000365466 108 ntBASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 MIR325-201ENST00000385260 98 ntBASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 SNRPEP7-201ENST00000438350 220 ntBASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 USP9YP10-201ENST00000454868 628 ntBASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 AC104563.1-201ENST00000476147 376 ntBASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 AC104090.1-201ENST00000506341 1171 ntBASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 AL158042.1-201ENST00000605338 460 ntBASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 AP000484.1-201ENST00000620067 1252 ntBASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 AC008443.7-201ENST00000622195 246 ntBASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.61□□□□□ -1.99
SUDS3Q9H7L9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 ZNF658B-202ENST00000615961 3375 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AL356421.1-201ENST00000403255 413 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 RPLP0P7-201ENST00000416050 667 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC007560.1-201ENST00000426912 237 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AL512844.2-201ENST00000433990 593 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 RPS12P2-201ENST00000439728 269 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC011816.1-201ENST00000441346 546 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 RNU7-23P-201ENST00000459465 62 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 MTND4LP3-201ENST00000468320 276 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC126182.1-201ENST00000478134 357 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 HMGB1P36-201ENST00000487709 576 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 RPS27P27-201ENST00000498779 255 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC093281.2-201ENST00000510153 597 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC024589.1-201ENST00000512207 263 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 TTC39CP1-201ENST00000512513 755 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 MRPS36P2-201ENST00000512569 299 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC118465.1-201ENST00000513820 1271 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 RNA5SP148-201ENST00000516527 94 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 CKS1BP7-201ENST00000522230 235 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 MTND4P33-201ENST00000556706 766 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AL450336.1-201ENST00000605180 586 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AL592221.1-201ENST00000605266 382 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC007349.4-201ENST00000608114 532 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AC004067.1-201ENST00000608733 700 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 MIR6817-201ENST00000615588 66 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 AL049641.1-201ENST00000441055 1948 ntBASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SUDS3Q9H7L9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SUDS3Q9H7L9 RNU6-777P-201ENST00000364265 104 ntBASIC2.59□□□□□ -1.99
SUDS3Q9H7L9 MIR514A1-201ENST00000385133 98 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms