Protein–RNA interactions for Protein: Q96Q05

TRAPPC9, Trafficking protein particle complex subunit 9, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9Q96Q05 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRAPPC9Q96Q05 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.62□□□□□ -1.83
TRAPPC9Q96Q05 AP001148.1-201ENST00000624124 2359 ntBASIC3.62□□□□□ -1.83
TRAPPC9Q96Q05 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.62□□□□□ -1.83
TRAPPC9Q96Q05 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 CUL1P1-201ENST00000509510 2425 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 RNA5SP119-201ENST00000362715 117 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 RNU6-817P-201ENST00000391083 104 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 RNA5SP31-201ENST00000411144 127 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 RN7SKP53-201ENST00000411337 315 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 RPS3AP44-201ENST00000425466 790 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 RPS4XP2-201ENST00000458402 793 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 RNU6-953P-201ENST00000459154 107 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 RNU6-314P-201ENST00000516574 104 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC026403.1-201ENST00000518938 295 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 CASP1P1-201ENST00000526345 212 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 OR5B19P-201ENST00000531766 928 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 ZNF519P2-201ENST00000557032 169 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC024619.4-201ENST00000580924 316 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 SRGNP1-201ENST00000603392 451 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC012507.3-201ENST00000603556 477 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AL137849.1-201ENST00000604767 169 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 XIST_intron.1-201ENST00000619444 68 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC093648.1-201ENST00000623546 606 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 CR381653.2-201ENST00000624041 768 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 SNORA50A-202ENST00000629536 136 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC068137.3-201ENST00000639191 341 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC073869.6-201ENST00000640656 341 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC009093.8-201ENST00000641769 292 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC007785.2-201ENST00000598627 1916 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 MTND5P17-201ENST00000418405 1603 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 AC027514.1-201ENST00000588561 1603 ntBASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRAPPC9Q96Q05 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 SNORA24.1-201ENST00000384401 135 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 MIR181A1-201ENST00000385026 110 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 MIR454-201ENST00000390180 115 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 RPL21P17-201ENST00000397467 475 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 CALM2P3-201ENST00000400429 449 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 RPS4XP8-201ENST00000402039 771 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 RNU2-33P-201ENST00000410344 192 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 TMEM167AP1-201ENST00000423409 219 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AC091286.1-201ENST00000431233 461 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AC092573.2-201ENST00000434546 243 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 PRDX3P3-201ENST00000447765 522 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 RPL23AP20-201ENST00000447965 421 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 PRSS3P4-201ENST00000453323 162 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 RNA5SP310-201ENST00000459084 116 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AC068657.1-201ENST00000520807 306 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 TPRKBP2-201ENST00000565969 475 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 HMGB1P6-201ENST00000569046 646 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 KLKP1-201ENST00000595979 403 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AC092954.2-201ENST00000609103 430 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 U4.5-201ENST00000617137 123 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 SEPT14P19-203ENST00000633205 211 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AC118273.1-201ENST00000525324 3006 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 ZNF680P1-201ENST00000436625 1469 ntBASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.6□□□□□ -1.83
TRAPPC9Q96Q05 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TRAPPC9Q96Q05 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms