Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CALR3Q96L12 MAPK10-286ENST00000641208 8747 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CALR3Q96L12 ZNF72P-201ENST00000425869 1908 ntBASIC5.34□□□□□ -1.55
CALR3Q96L12 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CALR3Q96L12 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
CALR3Q96L12 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
CALR3Q96L12 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CALR3Q96L12 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CALR3Q96L12 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CALR3Q96L12 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CALR3Q96L12 RNU1-94P-201ENST00000362627 173 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 RNU6-1222P-201ENST00000384615 107 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 MIR325-201ENST00000385260 98 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 RNU6-907P-201ENST00000390924 102 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 PPIAP31-201ENST00000405422 495 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.33□□□□□ -1.56
CALR3Q96L12 OSTCP8-201ENST00000445117 448 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 RPS3AP46-201ENST00000448352 682 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 NDUFS5P3-201ENST00000450668 321 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 MTCO3P8-201ENST00000453691 755 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 AL445433.1-201ENST00000457507 257 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 RPS17P2-201ENST00000461663 408 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 RN7SL547P-201ENST00000490793 290 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 RPL22P13-201ENST00000493291 347 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.33□□□□□ -1.56
CALR3Q96L12 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.33□□□□□ -1.56
CALR3Q96L12 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.33□□□□□ -1.56
CALR3Q96L12 HSPE1P5-201ENST00000561489 272 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.33□□□□□ -1.56
CALR3Q96L12 AC005046.1-201ENST00000608515 625 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 AC006023.2-201ENST00000609916 167 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 MIR6837-201ENST00000620884 64 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 SCARNA4-202ENST00000625402 129 ntBASIC5.33□□□□□ -1.56
CALR3Q96L12 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CALR3Q96L12 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.33□□□□□ -1.56
CALR3Q96L12 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.33□□□□□ -1.56
CALR3Q96L12 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CALR3Q96L12 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CALR3Q96L12 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.32□□□□□ -1.56
CALR3Q96L12 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CALR3Q96L12 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CALR3Q96L12 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CALR3Q96L12 SNORA31-201ENST00000362607 130 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 RNU6-428P-201ENST00000362942 107 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 SNORA63.7-201ENST00000365579 123 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 Y_RNA.476-201ENST00000384347 108 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 RNU1-77P-201ENST00000390868 162 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 RNU2-71P-201ENST00000411395 189 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.32□□□□□ -1.56
CALR3Q96L12 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.32□□□□□ -1.56
CALR3Q96L12 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.32□□□□□ -1.56
CALR3Q96L12 AC108075.1-201ENST00000424692 529 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 RPL21P91-201ENST00000429231 479 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 MTND3P9-201ENST00000429526 346 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 AC092423.1-201ENST00000430165 186 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.32□□□□□ -1.56
CALR3Q96L12 AC073910.1-201ENST00000445047 438 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 HIGD1AP2-201ENST00000446367 280 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 OR2AQ1P-201ENST00000451972 200 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.32□□□□□ -1.56
CALR3Q96L12 snoU109.2-201ENST00000459316 135 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 RNU7-169P-201ENST00000459456 61 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.32□□□□□ -1.56
CALR3Q96L12 AC017037.1-201ENST00000508460 471 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 RNU6-1282P-201ENST00000516735 96 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.32□□□□□ -1.56
CALR3Q96L12 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CALR3Q96L12 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.32□□□□□ -1.56
CALR3Q96L12 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.32□□□□□ -1.56
CALR3Q96L12 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.32□□□□□ -1.56
CALR3Q96L12 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.32□□□□□ -1.56
CALR3Q96L12 MIR4782-201ENST00000577987 79 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 HMGB1P50-201ENST00000605814 607 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 AC020634.1-201ENST00000608701 549 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 U4.7-201ENST00000638126 106 ntBASIC5.32□□□□□ -1.56
CALR3Q96L12 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CALR3Q96L12 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CALR3Q96L12 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CALR3Q96L12 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CALR3Q96L12 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CALR3Q96L12 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.31□□□□□ -1.56
CALR3Q96L12 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CALR3Q96L12 AC107068.1-201ENST00000563286 4218 ntBASIC5.31□□□□□ -1.56
CALR3Q96L12 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.31□□□□□ -1.56
CALR3Q96L12 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CALR3Q96L12 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CALR3Q96L12 RNU6-50P-201ENST00000362356 103 ntBASIC5.31□□□□□ -1.56
CALR3Q96L12 SNORA17.1-201ENST00000362945 126 ntBASIC5.31□□□□□ -1.56
CALR3Q96L12 SAR1AP2-201ENST00000392696 594 ntBASIC5.31□□□□□ -1.56
CALR3Q96L12 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.31□□□□□ -1.56
CALR3Q96L12 DDX39BP1-205ENST00000422507 192 ntBASIC5.31□□□□□ -1.56
CALR3Q96L12 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.31□□□□□ -1.56
CALR3Q96L12 AL512844.2-201ENST00000433990 593 ntBASIC5.31□□□□□ -1.56
CALR3Q96L12 NDUFB4P6-201ENST00000436819 366 ntBASIC5.31□□□□□ -1.56
CALR3Q96L12 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.31□□□□□ -1.56
CALR3Q96L12 RPS3AP12-201ENST00000443616 753 ntBASIC5.31□□□□□ -1.56
CALR3Q96L12 AL161636.2-201ENST00000445179 927 ntBASIC5.31□□□□□ -1.56
CALR3Q96L12 RNA5SP497-201ENST00000516081 97 ntBASIC5.31□□□□□ -1.56
CALR3Q96L12 RNA5SP468-201ENST00000516782 93 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms