Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
MS4A4AQ96JQ5 AL353796.1-201ENST00000561542 3241 ntBASIC6.21□□□□□ -1.41
MS4A4AQ96JQ5 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.21□□□□□ -1.41
MS4A4AQ96JQ5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
MS4A4AQ96JQ5 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
MS4A4AQ96JQ5 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
MS4A4AQ96JQ5 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MS4A4AQ96JQ5 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MS4A4AQ96JQ5 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 AC126755.2-208ENST00000327792 462 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 AC138969.1-213ENST00000331436 462 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 SNORD1C-201ENST00000363315 78 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 SNORD32A-201ENST00000364805 84 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 RNU1-136P-201ENST00000384181 164 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 RNU6-460P-201ENST00000391158 108 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 AC009963.1-201ENST00000417265 157 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 FTLP19-201ENST00000433300 394 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 RN7SL481P-201ENST00000477764 299 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 AC016632.1-201ENST00000503994 196 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 AC013791.1-201ENST00000616619 62 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 U6.99-201ENST00000637524 83 ntBASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MS4A4AQ96JQ5 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 AC099654.7-201ENST00000635788 2127 ntBASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 RNU6-1180P-201ENST00000364935 107 ntBASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 CYP4F29P-201ENST00000420685 446 ntBASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 GPM6BP3-201ENST00000442797 145 ntBASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 EIF4A1P11-201ENST00000451239 222 ntBASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 U8.19-201ENST00000459095 133 ntBASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 CYCSP1-201ENST00000604815 315 ntBASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 SNORA43.4-201ENST00000629559 138 ntBASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 AC144833.1-201ENST00000567953 4089 ntBASIC6.2□□□□□ -1.42
MS4A4AQ96JQ5 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 AC093535.2-201ENST00000624769 2326 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 snoU2_19.4-201ENST00000364329 80 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 RNU6-643P-201ENST00000384018 107 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 MIR600-201ENST00000385007 98 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 MIR616-201ENST00000385293 97 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 AC007919.1-201ENST00000429380 217 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 AL590399.4-201ENST00000436561 601 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 AL121914.1-201ENST00000450188 156 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 RPS4XP13-201ENST00000483219 789 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 RNU6-1256P-201ENST00000516539 103 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 MIR5582-201ENST00000579697 68 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 MIR4691-201ENST00000583764 85 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms