Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RNU6-390P-201ENST00000516259 103 ntBASIC3.8□□□□□ -1.8
CPEB3Q8NE35 Y_RNA.689-201ENST00000516589 107 ntBASIC3.8□□□□□ -1.8
CPEB3Q8NE35 AC100830.2-201ENST00000581636 240 ntBASIC3.8□□□□□ -1.8
CPEB3Q8NE35 MIR3941-201ENST00000582572 103 ntBASIC3.8□□□□□ -1.8
CPEB3Q8NE35 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.8□□□□□ -1.8
CPEB3Q8NE35 AC174048.1-201ENST00000603389 144 ntBASIC3.8□□□□□ -1.8
CPEB3Q8NE35 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.8□□□□□ -1.8
CPEB3Q8NE35 AL021997.2-201ENST00000615674 271 ntBASIC3.8□□□□□ -1.8
CPEB3Q8NE35 AL138721.1-201ENST00000616756 179 ntBASIC3.8□□□□□ -1.8
CPEB3Q8NE35 uc_338.13-201ENST00000618243 179 ntBASIC3.8□□□□□ -1.8
CPEB3Q8NE35 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CPEB3Q8NE35 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.8□□□□□ -1.8
CPEB3Q8NE35 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CPEB3Q8NE35 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.8□□□□□ -1.8
CPEB3Q8NE35 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CPEB3Q8NE35 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.8□□□□□ -1.8
CPEB3Q8NE35 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.8□□□□□ -1.8
CPEB3Q8NE35 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 RNU6-562P-201ENST00000362731 107 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 SNORA56-201ENST00000383966 129 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 RNU6-434P-201ENST00000384376 107 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 CISD1P1-201ENST00000393907 327 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 SNORA11F-201ENST00000408237 128 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 RPS12P23-201ENST00000419579 400 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 PHBP16-201ENST00000446318 950 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 RPL21P23-201ENST00000446654 460 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 RPL23AP24-201ENST00000458203 385 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 RN7SL98P-201ENST00000462271 300 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC087884.1-201ENST00000469738 328 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 RNU6-976P-201ENST00000516086 111 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 RN7SKP295-201ENST00000517264 153 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 RANP9-201ENST00000519957 271 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC126177.3-201ENST00000551839 688 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 MIR4277-201ENST00000578298 84 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 MIR4644-201ENST00000579929 84 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AL354984.3-201ENST00000604803 325 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC113403.1-201ENST00000604910 193 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC133104.2-201ENST00000615272 193 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AL359547.2-201ENST00000615810 418 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC010378.1-201ENST00000619270 362 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 7SK.10-201ENST00000621414 298 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 AC026951.1-201ENST00000559530 2459 ntBASIC3.79□□□□□ -1.8
CPEB3Q8NE35 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CPEB3Q8NE35 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.78□□□□□ -1.8
CPEB3Q8NE35 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CPEB3Q8NE35 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CPEB3Q8NE35 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CPEB3Q8NE35 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CPEB3Q8NE35 LINC02471-203ENST00000641941 4752 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CPEB3Q8NE35 RNU6-1309P-201ENST00000363305 108 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 RNU6-1040P-201ENST00000383974 107 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 RNU6-190P-201ENST00000384154 102 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 AL139039.1-201ENST00000401900 692 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 AL391417.1-201ENST00000404100 426 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 RNU2-43P-201ENST00000410306 190 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 RNA5SP39-201ENST00000411245 120 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 RNA5SP111-201ENST00000411386 101 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.78□□□□□ -1.8
CPEB3Q8NE35 AC018865.2-201ENST00000423631 129 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 RPL7P37-201ENST00000425095 738 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 RPL18P10-201ENST00000425606 538 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.78□□□□□ -1.8
CPEB3Q8NE35 AL591704.1-201ENST00000432574 275 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 RPL23AP52-201ENST00000439311 478 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 TXNP1-201ENST00000441872 371 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 AL035666.1-201ENST00000446195 348 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 TPT1P12-201ENST00000448968 492 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 RPS11P1-201ENST00000451072 473 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.78□□□□□ -1.8
CPEB3Q8NE35 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.78□□□□□ -1.8
CPEB3Q8NE35 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.78□□□□□ -1.8
CPEB3Q8NE35 AL135752.1-201ENST00000479477 471 ntBASIC3.78□□□□□ -1.8
CPEB3Q8NE35 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms