Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC090617.3-201ENST00000573670 475 ntBASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 MIR4700-201ENST00000578311 74 ntBASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 FAM60BP-201ENST00000578364 658 ntBASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 Y_RNA.771-201ENST00000598668 102 ntBASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 SNORD113-5-201ENST00000607261 78 ntBASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 AC074140.1-201ENST00000621617 208 ntBASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 Y_RNA.789-201ENST00000622480 102 ntBASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LYSMD3Q7Z3D4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 U8.4-201ENST00000363626 134 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 RNU6-384P-201ENST00000364900 104 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 Y_RNA.435-201ENST00000384095 112 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 Y_RNA.569-201ENST00000384749 103 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 Y_RNA.623-201ENST00000411128 95 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 AL117339.3-201ENST00000418733 162 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 RPL21P40-201ENST00000428586 483 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 HSPD1P21-201ENST00000436541 245 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 AC010683.1-201ENST00000473673 378 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 RPS26P21-201ENST00000475397 348 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 APOOP4-201ENST00000513530 597 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 RNU6-1315P-201ENST00000517187 99 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 MIR1273C-201ENST00000578669 77 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 AC116447.1-201ENST00000613153 453 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 MTND1P7-201ENST00000632801 297 ntBASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.18□□□□□ -1.58
LYSMD3Q7Z3D4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 Y_RNA.568-201ENST00000384742 113 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 Y_RNA.580-201ENST00000391004 95 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 U3.36-201ENST00000408418 213 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 RNU4-30P-201ENST00000410245 143 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 RN7SKP114-201ENST00000410327 279 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 RNU6-603P-201ENST00000411403 107 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 CYCSP10-201ENST00000417973 294 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 MTCO1P39-201ENST00000426148 480 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 AC005002.2-201ENST00000438228 269 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 RPS29P27-201ENST00000463711 170 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 RPL7AP6-201ENST00000477943 801 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 RN7SL97P-201ENST00000486780 299 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 SNORA31.22-201ENST00000517204 135 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 AL157871.3-201ENST00000557231 293 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 MIR4308-201ENST00000580634 81 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 AP001642.1-201ENST00000624727 2117 ntBASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.17□□□□□ -1.58
LYSMD3Q7Z3D4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 UBE2L2-201ENST00000254302 429 ntBASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 SNORA25.1-201ENST00000362326 128 ntBASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 RNU6-263P-201ENST00000363811 107 ntBASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 Y_RNA.308-201ENST00000365043 101 ntBASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 RNU6-926P-201ENST00000384075 107 ntBASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 RNU5E-9P-201ENST00000411164 104 ntBASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 RPL7AP73-201ENST00000413490 353 ntBASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 RPS20P1-201ENST00000434853 354 ntBASIC5.16□□□□□ -1.58
LYSMD3Q7Z3D4 AL162725.1-201ENST00000435405 301 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms