Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
GTF2A1P52655 RPAP2P1-201ENST00000603626 1168 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 AC069294.1-201ENST00000608397 350 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 AC010678.1-201ENST00000614118 713 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 AL590808.1-201ENST00000618696 141 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.47□□□□□ -2.17
GTF2A1P52655 AP003400.6-201ENST00000624698 740 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 AL590396.2-201ENST00000636511 1041 ntBASIC1.47□□□□□ -2.17
GTF2A1P52655 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
GTF2A1P52655 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
GTF2A1P52655 AC091812.1-201ENST00000432235 1948 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
GTF2A1P52655 RNU6-1339P-201ENST00000363574 91 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
GTF2A1P52655 RNU6-750P-201ENST00000390946 107 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
GTF2A1P52655 AC016769.3-201ENST00000396562 315 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 BOLA3P4-201ENST00000418151 400 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 RPL30P4-201ENST00000429309 333 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 MICF-203ENST00000432679 129 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.46□□□□□ -2.18
GTF2A1P52655 HMGN2P10-201ENST00000448085 265 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 RNU1-103P-201ENST00000516502 125 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.46□□□□□ -2.18
GTF2A1P52655 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.46□□□□□ -2.18
GTF2A1P52655 MIR4713-201ENST00000582691 75 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 AC087241.4-201ENST00000612441 480 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 MIR6130-201ENST00000619419 109 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 AC119674.1-220ENST00000641502 1048 ntBASIC1.46□□□□□ -2.18
GTF2A1P52655 AC007785.2-201ENST00000598627 1916 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
GTF2A1P52655 ENSAP3-201ENST00000312710 333 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 RNU5A-1-201ENST00000362698 116 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 U3.13-201ENST00000364804 214 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 MIR135A2-201ENST00000384854 100 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 SNORA40.18-201ENST00000391200 128 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 UBE2V1P2-201ENST00000397758 440 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 RN7SKP101-201ENST00000411376 320 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 NDUFB4P7-201ENST00000423198 363 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.45□□□□□ -2.18
GTF2A1P52655 PNRC2P1-201ENST00000423940 420 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 Z93242.1-201ENST00000427102 353 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 AC015922.2-201ENST00000435593 184 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 AP000949.1-201ENST00000438328 629 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 THAP5P1-201ENST00000439089 262 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 RPL26P6-201ENST00000440913 438 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.45□□□□□ -2.18
GTF2A1P52655 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.45□□□□□ -2.18
GTF2A1P52655 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.45□□□□□ -2.18
GTF2A1P52655 AC017007.3-201ENST00000479865 435 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 LARP1BP2-201ENST00000486594 519 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 HMGB1P36-201ENST00000487709 576 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 FAM206BP-201ENST00000510179 541 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 LTV1P1-201ENST00000510683 1237 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 Y_RNA.675-201ENST00000516389 149 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 HSPE1P18-201ENST00000517602 280 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.45□□□□□ -2.18
GTF2A1P52655 AP002770.2-201ENST00000543613 532 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.45□□□□□ -2.18
GTF2A1P52655 BNIP3P25-201ENST00000596023 559 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 AC104763.3-201ENST00000613765 618 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.45□□□□□ -2.18
GTF2A1P52655 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
GTF2A1P52655 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.44□□□□□ -2.18
GTF2A1P52655 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
GTF2A1P52655 MIR449A-201ENST00000362113 91 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 RNU6-253P-201ENST00000384730 105 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 HMGN2P39-201ENST00000398005 273 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 RNU2-43P-201ENST00000410306 190 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.44□□□□□ -2.18
GTF2A1P52655 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.44□□□□□ -2.18
GTF2A1P52655 AL121601.2-201ENST00000438019 707 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 RPL7P54-201ENST00000438336 674 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 AC080013.2-201ENST00000460866 323 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 AC092436.1-201ENST00000506450 503 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.44□□□□□ -2.18
GTF2A1P52655 RNA5SP165-201ENST00000517142 115 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.44□□□□□ -2.18
GTF2A1P52655 AC027309.2-201ENST00000520566 192 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.44□□□□□ -2.18
GTF2A1P52655 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.44□□□□□ -2.18
GTF2A1P52655 AP000403.1-201ENST00000603349 851 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 AC103710.2-201ENST00000609912 942 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 AC022202.1-201ENST00000613515 211 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.44□□□□□ -2.18
GTF2A1P52655 MIR7843-201ENST00000622274 79 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 AP003476.1-201ENST00000623984 516 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 PISRT1-201ENST00000626175 531 ntBASIC1.44□□□□□ -2.18
GTF2A1P52655 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
GTF2A1P52655 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
GTF2A1P52655 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AC233981.1-201ENST00000423224 461 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.43□□□□□ -2.18
GTF2A1P52655 AC092393.1-201ENST00000439625 742 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 RPL7P36-201ENST00000444633 681 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AP1S2P1-201ENST00000457344 379 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.43□□□□□ -2.18
GTF2A1P52655 AL049874.1-201ENST00000489560 388 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms