Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF144AP50876 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF144AP50876 Y_RNA.262-201ENST00000364641 102 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 RNA5SP122-201ENST00000384457 108 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF144AP50876 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF144AP50876 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF144AP50876 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF144AP50876 snoU13.3-201ENST00000459441 104 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 RN7SL591P-201ENST00000496150 292 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF144AP50876 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF144AP50876 AP004607.2-201ENST00000533949 322 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF144AP50876 SNORD95-201ENST00000579879 68 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 MIR4423-201ENST00000580922 80 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF144AP50876 AL645944.1-201ENST00000603857 493 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 AC005828.6-201ENST00000606610 232 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF144AP50876 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF144AP50876 AC127024.6-201ENST00000621598 424 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 AC018445.2-201ENST00000622987 260 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 AC132068.1-201ENST00000623805 459 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF144AP50876 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF144AP50876 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
RNF144AP50876 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF144AP50876 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF144AP50876 AL079305.1-201ENST00000623159 3008 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF144AP50876 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF144AP50876 AL445487.1-201ENST00000415694 1580 ntBASIC5.03□□□□□ -1.6
RNF144AP50876 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF144AP50876 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF144AP50876 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF144AP50876 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF144AP50876 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF144AP50876 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF144AP50876 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF144AP50876 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF144AP50876 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF144AP50876 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
RNF144AP50876 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RNF144AP50876 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF144AP50876 Y_RNA.446-201ENST00000384178 104 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 MIR34A-201ENST00000385130 110 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 UBA52P6-201ENST00000399822 382 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 RN7SKP286-201ENST00000410894 299 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF144AP50876 AP000907.1-201ENST00000428428 510 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 AC008267.6-201ENST00000441664 139 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 UQCRBP2-201ENST00000447827 297 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 SSXP4-201ENST00000451349 245 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 AC117440.1-201ENST00000474107 571 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 RPL23AP75-201ENST00000491601 451 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF144AP50876 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RNF144AP50876 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.02□□□□□ -1.61
RNF144AP50876 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.02□□□□□ -1.61
RNF144AP50876 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
RNF144AP50876 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 FO393422.1-201ENST00000603908 708 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 uc_338.7-201ENST00000621834 124 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RNF144AP50876 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RNF144AP50876 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
RNF144AP50876 AL672167.1-205ENST00000641112 3080 ntBASIC5.02□□□□□ -1.61
RNF144AP50876 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF144AP50876 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF144AP50876 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.02□□□□□ -1.61
RNF144AP50876 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF144AP50876 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF144AP50876 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
RNF144AP50876 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF144AP50876 AC100821.1-201ENST00000523153 2479 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 AC004817.4-201ENST00000602396 3625 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RNF144AP50876 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RNF144AP50876 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF144AP50876 RNU6-626P-201ENST00000363354 107 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 RNA5SP234-201ENST00000363916 119 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 RNA5SP242-201ENST00000364171 118 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 Y_RNA.215-201ENST00000364204 112 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 RNU6-336P-201ENST00000364891 107 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 RNU6-215P-201ENST00000365169 102 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 RNU5E-7P-201ENST00000365290 117 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 Y_RNA.353-201ENST00000365440 108 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF144AP50876 RNU6-44P-201ENST00000384045 107 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 MIR186-201ENST00000384988 86 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 RNU1-77P-201ENST00000390868 162 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 RNU6-837P-201ENST00000391056 108 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 RNA5SP241-201ENST00000391326 114 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF144AP50876 Y_RNA.597-201ENST00000410463 100 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 OOSP1P1-201ENST00000423265 274 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 AC011742.1-201ENST00000431448 434 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 GSTM5P1-201ENST00000434751 660 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms