Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC006254.2-201ENST00000603259 279 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 AC174048.1-201ENST00000603389 144 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 AC015914.2-201ENST00000618167 288 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CHRNA4P43681 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.94□□□□□ -1.62
CHRNA4P43681 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CHRNA4P43681 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.94□□□□□ -1.62
CHRNA4P43681 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.94□□□□□ -1.62
CHRNA4P43681 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
CHRNA4P43681 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CHRNA4P43681 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA4P43681 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA4P43681 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.94□□□□□ -1.62
CHRNA4P43681 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.93□□□□□ -1.62
CHRNA4P43681 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CHRNA4P43681 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.93□□□□□ -1.62
CHRNA4P43681 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHRNA4P43681 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHRNA4P43681 AC008758.3-201ENST00000507003 1829 ntBASIC4.93□□□□□ -1.62
CHRNA4P43681 AC099654.2-201ENST00000433031 1980 ntBASIC4.93□□□□□ -1.62
CHRNA4P43681 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHRNA4P43681 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CHRNA4P43681 RNA5SP494-201ENST00000410653 129 ntBASIC4.93□□□□□ -1.62
CHRNA4P43681 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.93□□□□□ -1.62
CHRNA4P43681 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.93□□□□□ -1.62
CHRNA4P43681 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.93□□□□□ -1.62
CHRNA4P43681 AL133244.1-201ENST00000456007 258 ntBASIC4.93□□□□□ -1.62
CHRNA4P43681 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHRNA4P43681 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.93□□□□□ -1.62
CHRNA4P43681 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.93□□□□□ -1.62
CHRNA4P43681 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.93□□□□□ -1.62
CHRNA4P43681 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.93□□□□□ -1.62
CHRNA4P43681 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.93□□□□□ -1.62
CHRNA4P43681 CYCSP40-201ENST00000575927 294 ntBASIC4.93□□□□□ -1.62
CHRNA4P43681 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.93□□□□□ -1.62
CHRNA4P43681 AL670379.2-201ENST00000604983 252 ntBASIC4.93□□□□□ -1.62
CHRNA4P43681 MIR7155-201ENST00000615925 56 ntBASIC4.93□□□□□ -1.62
CHRNA4P43681 SNHG22-203ENST00000617833 660 ntBASIC4.93□□□□□ -1.62
CHRNA4P43681 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.93□□□□□ -1.62
CHRNA4P43681 AC007998.5-201ENST00000622938 237 ntBASIC4.93□□□□□ -1.62
CHRNA4P43681 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
CHRNA4P43681 Z99571.1-201ENST00000636677 394 ntBASIC4.93□□□□□ -1.62
CHRNA4P43681 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
CHRNA4P43681 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CHRNA4P43681 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CHRNA4P43681 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CHRNA4P43681 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.92□□□□□ -1.62
CHRNA4P43681 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHRNA4P43681 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.92□□□□□ -1.62
CHRNA4P43681 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.92□□□□□ -1.62
CHRNA4P43681 MTND5P9-201ENST00000503854 1755 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 AL133270.1-201ENST00000402635 279 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 OR2AM1P-201ENST00000422137 422 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 RAB28P5-201ENST00000427490 651 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 TOMM20P4-201ENST00000427861 435 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 RN7SL517P-201ENST00000462240 305 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 AC133134.1-201ENST00000466800 359 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 RFPL4AP5-201ENST00000514977 504 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 Y_RNA.689-201ENST00000516589 107 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.92□□□□□ -1.62
CHRNA4P43681 AC007458.1-201ENST00000542812 373 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.92□□□□□ -1.62
CHRNA4P43681 AC006077.1-201ENST00000604746 343 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 AC037487.3-201ENST00000606668 112 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 MIR6748-201ENST00000610433 71 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 AC240442.1-201ENST00000616055 283 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 AP001005.3-201ENST00000622049 129 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 AC091905.4-201ENST00000623432 202 ntBASIC4.92□□□□□ -1.62
CHRNA4P43681 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.92□□□□□ -1.62
CHRNA4P43681 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.92□□□□□ -1.62
CHRNA4P43681 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.92□□□□□ -1.62
CHRNA4P43681 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CHRNA4P43681 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHRNA4P43681 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA4P43681 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CHRNA4P43681 SMG1P4-204ENST00000523028 4131 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CHRNA4P43681 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CHRNA4P43681 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA4P43681 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA4P43681 SNORA63.4-201ENST00000362763 126 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 RNA5SP267-201ENST00000364893 126 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 MIR569-201ENST00000385228 96 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 CTSL3P-202ENST00000412179 788 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 RPS15AP6-201ENST00000420703 385 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 AC092573.2-201ENST00000434546 243 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 RPL23AP33-201ENST00000442301 452 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 AC112498.1-201ENST00000444401 332 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.91□□□□□ -1.62
CHRNA4P43681 AC079168.2-201ENST00000453977 416 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.91□□□□□ -1.62
CHRNA4P43681 RPL23AP65-201ENST00000475608 468 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 RNY3P16-201ENST00000516338 101 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 SNORD116-25-201ENST00000516517 92 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 DEFB108D-201ENST00000527787 222 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHRNA4P43681 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.91□□□□□ -1.62
CHRNA4P43681 MIR4679-2-201ENST00000578358 77 ntBASIC4.91□□□□□ -1.62
CHRNA4P43681 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms