Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 HSPE1P23-201ENST00000509838 286 ntBASIC3.36□□□□□ -1.87
BDNFP23560 AC098591.2-201ENST00000510152 315 ntBASIC3.36□□□□□ -1.87
BDNFP23560 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
BDNFP23560 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.36□□□□□ -1.87
BDNFP23560 UBL5P2-201ENST00000583788 219 ntBASIC3.36□□□□□ -1.87
BDNFP23560 AC008507.1-201ENST00000587506 734 ntBASIC3.36□□□□□ -1.87
BDNFP23560 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.36□□□□□ -1.87
BDNFP23560 AC005000.2-201ENST00000605468 310 ntBASIC3.36□□□□□ -1.87
BDNFP23560 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.36□□□□□ -1.87
BDNFP23560 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
BDNFP23560 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.36□□□□□ -1.87
BDNFP23560 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
BDNFP23560 AC093591.3-201ENST00000634516 308 ntBASIC3.36□□□□□ -1.87
BDNFP23560 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
BDNFP23560 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BDNFP23560 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.36□□□□□ -1.87
BDNFP23560 AC004520.1-201ENST00000608362 1413 ntBASIC3.36□□□□□ -1.87
BDNFP23560 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.35□□□□□ -1.87
BDNFP23560 OR1S2-201ENST00000302592 978 ntBASIC3.35□□□□□ -1.87
BDNFP23560 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
BDNFP23560 RNU6-701P-201ENST00000384059 107 ntBASIC3.35□□□□□ -1.87
BDNFP23560 RPS20P2-201ENST00000402520 389 ntBASIC3.35□□□□□ -1.87
BDNFP23560 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.35□□□□□ -1.87
BDNFP23560 SKA2P1-201ENST00000425592 390 ntBASIC3.35□□□□□ -1.87
BDNFP23560 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.35□□□□□ -1.87
BDNFP23560 AL591719.1-201ENST00000444669 744 ntBASIC3.35□□□□□ -1.87
BDNFP23560 ELOCP23-201ENST00000452014 332 ntBASIC3.35□□□□□ -1.87
BDNFP23560 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.35□□□□□ -1.87
BDNFP23560 AL441985.1-201ENST00000457727 251 ntBASIC3.35□□□□□ -1.87
BDNFP23560 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.35□□□□□ -1.87
BDNFP23560 MRPS36P3-201ENST00000519284 130 ntBASIC3.35□□□□□ -1.87
BDNFP23560 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.35□□□□□ -1.87
BDNFP23560 AP006587.4-201ENST00000526053 529 ntBASIC3.35□□□□□ -1.87
BDNFP23560 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.35□□□□□ -1.87
BDNFP23560 MIR4506-201ENST00000584693 77 ntBASIC3.35□□□□□ -1.87
BDNFP23560 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.35□□□□□ -1.87
BDNFP23560 AC174048.1-201ENST00000603389 144 ntBASIC3.35□□□□□ -1.87
BDNFP23560 AC091903.1-201ENST00000624322 454 ntBASIC3.35□□□□□ -1.87
BDNFP23560 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.35□□□□□ -1.87
BDNFP23560 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
BDNFP23560 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
BDNFP23560 AC092104.1-201ENST00000497346 1441 ntBASIC3.35□□□□□ -1.87
BDNFP23560 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.34□□□□□ -1.87
BDNFP23560 AL353743.1-202ENST00000431724 1695 ntBASIC3.34□□□□□ -1.87
BDNFP23560 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.87
BDNFP23560 Y_RNA.97-201ENST00000363094 102 ntBASIC3.34□□□□□ -1.87
BDNFP23560 RNU5A-2P-201ENST00000384337 116 ntBASIC3.34□□□□□ -1.87
BDNFP23560 RNU6-658P-201ENST00000384606 106 ntBASIC3.34□□□□□ -1.87
BDNFP23560 MIR301A-201ENST00000385261 86 ntBASIC3.34□□□□□ -1.87
BDNFP23560 SNORA48.5-201ENST00000391143 135 ntBASIC3.34□□□□□ -1.87
BDNFP23560 MIR887-201ENST00000401258 79 ntBASIC3.34□□□□□ -1.87
BDNFP23560 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.34□□□□□ -1.87
BDNFP23560 USP9YP6-201ENST00000413550 854 ntBASIC3.34□□□□□ -1.87
BDNFP23560 RPS7P13-201ENST00000413955 498 ntBASIC3.34□□□□□ -1.87
BDNFP23560 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.34□□□□□ -1.87
BDNFP23560 AC010099.3-201ENST00000423896 409 ntBASIC3.34□□□□□ -1.87
BDNFP23560 AC137499.1-201ENST00000427602 88 ntBASIC3.34□□□□□ -1.87
BDNFP23560 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.34□□□□□ -1.87
BDNFP23560 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.34□□□□□ -1.87
BDNFP23560 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.34□□□□□ -1.87
BDNFP23560 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.34□□□□□ -1.87
BDNFP23560 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.87
BDNFP23560 TRBV1-201ENST00000476502 284 ntBASIC3.34□□□□□ -1.87
BDNFP23560 RNU6-677P-201ENST00000516914 101 ntBASIC3.34□□□□□ -1.87
BDNFP23560 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.34□□□□□ -1.87
BDNFP23560 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.34□□□□□ -1.87
BDNFP23560 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.34□□□□□ -1.87
BDNFP23560 AC007536.1-201ENST00000533382 349 ntBASIC3.34□□□□□ -1.87
BDNFP23560 MTND1P24-201ENST00000552175 861 ntBASIC3.34□□□□□ -1.87
BDNFP23560 H3F3AP1-201ENST00000559984 334 ntBASIC3.34□□□□□ -1.87
BDNFP23560 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.34□□□□□ -1.87
BDNFP23560 VN1R90P-201ENST00000595717 726 ntBASIC3.34□□□□□ -1.87
BDNFP23560 MIR7157-201ENST00000635801 60 ntBASIC3.34□□□□□ -1.87
BDNFP23560 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
BDNFP23560 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
BDNFP23560 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.34□□□□□ -1.88
BDNFP23560 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
BDNFP23560 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.33□□□□□ -1.88
BDNFP23560 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
BDNFP23560 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BDNFP23560 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BDNFP23560 RNU6-525P-201ENST00000363685 104 ntBASIC3.33□□□□□ -1.88
BDNFP23560 U3.11-201ENST00000364476 212 ntBASIC3.33□□□□□ -1.88
BDNFP23560 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BDNFP23560 SNORA7.4-201ENST00000384249 137 ntBASIC3.33□□□□□ -1.88
BDNFP23560 RNU6-809P-201ENST00000384461 107 ntBASIC3.33□□□□□ -1.88
BDNFP23560 MIR23A-201ENST00000385245 73 ntBASIC3.33□□□□□ -1.88
BDNFP23560 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.33□□□□□ -1.88
BDNFP23560 HMGN2P10-201ENST00000448085 265 ntBASIC3.33□□□□□ -1.88
BDNFP23560 NIPA2P5-201ENST00000452282 464 ntBASIC3.33□□□□□ -1.88
BDNFP23560 MTND1P12-201ENST00000455231 147 ntBASIC3.33□□□□□ -1.88
BDNFP23560 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.33□□□□□ -1.88
BDNFP23560 HMGN1P18-201ENST00000457642 277 ntBASIC3.33□□□□□ -1.88
BDNFP23560 RPS29P2-201ENST00000479278 136 ntBASIC3.33□□□□□ -1.88
BDNFP23560 RPS4XP22-201ENST00000480755 780 ntBASIC3.33□□□□□ -1.88
BDNFP23560 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.33□□□□□ -1.88
BDNFP23560 RNA5SP341-201ENST00000516261 117 ntBASIC3.33□□□□□ -1.88
BDNFP23560 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
BDNFP23560 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
BDNFP23560 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms