Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
COL4A1P02462 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A1P02462 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
COL4A1P02462 SNORA14A-201ENST00000364773 135 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 SNORA40.6-201ENST00000391153 128 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 SFR1P1-201ENST00000403720 688 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 MIR1250-201ENST00000408098 113 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A1P02462 MTATP6P19-201ENST00000413797 659 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A1P02462 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.61□□□□□ -2.15
COL4A1P02462 SFR1P2-201ENST00000421841 730 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 RPL36P19-201ENST00000430744 301 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A1P02462 AC005345.1-201ENST00000431868 217 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A1P02462 CKS1BP5-201ENST00000434172 273 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A1P02462 SNRPGP13-201ENST00000442212 177 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 MRPL42P4-201ENST00000453267 443 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A1P02462 RPL32P14-201ENST00000463196 378 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 SYPL1P1-201ENST00000473622 768 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 MTCO2P9-201ENST00000503214 694 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A1P02462 LTV1P1-201ENST00000510683 1237 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A1P02462 AC109635.4-202ENST00000531666 412 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 CYB5AP5-201ENST00000549779 389 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.61□□□□□ -2.15
COL4A1P02462 ANP32BP3-201ENST00000559213 706 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AC107954.1-201ENST00000565906 727 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 SNHG22-203ENST00000617833 660 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
COL4A1P02462 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
COL4A1P02462 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
COL4A1P02462 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A1P02462 PABPC1P7-201ENST00000413177 1513 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
COL4A1P02462 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL4A1P02462 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A1P02462 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
COL4A1P02462 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL4A1P02462 RNU6-1249P-201ENST00000363237 111 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 RNU6-1066P-201ENST00000363573 105 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 SNORD114-27-201ENST00000363766 70 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 RNU6-353P-201ENST00000364266 108 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AL138880.1-201ENST00000405824 642 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.61□□□□□ -2.15
COL4A1P02462 RPL21P66-201ENST00000426566 466 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A1P02462 UBBP3-201ENST00000445497 241 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A1P02462 RPL21P134-201ENST00000453468 483 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 RNU7-140P-201ENST00000459546 60 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 COX6CP14-201ENST00000469580 174 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AC118282.2-201ENST00000508739 374 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AC011604.1-201ENST00000545978 196 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A1P02462 NBEAP1-201ENST00000554452 979 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A1P02462 SNORD39.3-201ENST00000584451 71 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 OR4G1P-201ENST00000588632 938 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 MIR6515-201ENST00000619843 57 ntBASIC1.61□□□□□ -2.15
COL4A1P02462 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A1P02462 AP001350.1-201ENST00000601906 1524 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 AC093536.2-201ENST00000565257 1406 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
COL4A1P02462 RNA5SP139-201ENST00000364340 117 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 Y_RNA.295-201ENST00000364918 102 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.6□□□□□ -2.15
COL4A1P02462 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.6□□□□□ -2.15
COL4A1P02462 OR1L1-202ENST00000373686 1083 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 RNU6-207P-201ENST00000384137 107 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 AP002784.2-201ENST00000397300 549 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 AL030996.1-201ENST00000411430 235 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.6□□□□□ -2.15
COL4A1P02462 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A1P02462 TAF13P2-201ENST00000416876 286 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A1P02462 MTATP6P4-201ENST00000427725 675 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 HMGN2P18-201ENST00000450680 270 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.6□□□□□ -2.15
COL4A1P02462 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.6□□□□□ -2.15
COL4A1P02462 ATP5EP1-201ENST00000510257 156 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.6□□□□□ -2.15
COL4A1P02462 Y_RNA.675-201ENST00000516389 149 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.6□□□□□ -2.15
COL4A1P02462 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.6□□□□□ -2.15
COL4A1P02462 MTND4LP25-201ENST00000570218 163 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 GAS5-AS1-201ENST00000602767 694 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 AC068831.7-201ENST00000616954 363 ntBASIC1.6□□□□□ -2.15
COL4A1P02462 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
COL4A1P02462 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL4A1P02462 RNU6-50P-201ENST00000362356 103 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 RNU6-730P-201ENST00000383954 104 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 MIR16-1-201ENST00000385271 89 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.15
COL4A1P02462 RNU4-78P-201ENST00000410940 126 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms